RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 TRPV4Q9HBA0 871 aa29.4■■■□□ 2.3
LMO1-202ENST00000428101 RBAKQ9NYW8 714 aaPredicted RBP29.4■■■□□ 2.3
LMO1-202ENST00000428101 KPNA7A9QM74 516 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 EXTL3O43909 919 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 CUTAO60888 179 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 VIPR2P41587 438 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 CDR1P51861 262 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 TFAMQ00059 246 aaKnown RBP29.39■■■□□ 2.3
LMO1-202ENST00000428101 VITQ6UXI7 678 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 DNAJB7Q7Z6W7 309 aaPredicted RBP29.39■■■□□ 2.3
LMO1-202ENST00000428101 LRRTM3Q86VH5 581 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 C1orf210Q8IVY1 113 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 C1orf127Q8N9H9 656 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 TRIM9Q9C026 710 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 CUEDC2Q9H467 287 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 LTB4R2Q9NPC1 389 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 HEBP1Q9NRV9 189 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 ASB3Q9Y575 518 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 NCANO14594 1321 aa29.39■■■□□ 2.3
LMO1-202ENST00000428101 FAM186AA6NE01 2351 aa29.39■■■□□ 2.29
LMO1-202ENST00000428101 F5P12259 2224 aa29.39■■■□□ 2.29
LMO1-202ENST00000428101 A0A1W2PRU2 124 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 SHISA7A6NL88 538 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 FAM170BA6NMN3 283 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 UBXN2BQ14CS0 331 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 SV2CQ496J9 727 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 TPRG1Q6ZUI0 275 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 HSCBQ8IWL3 235 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 CXorf38Q8TB03 319 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 DNASE1L2Q92874 299 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 NKD2Q969F2 451 aaPredicted RBP29.38■■■□□ 2.29
LMO1-202ENST00000428101 PSMG2Q969U7 264 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 DHX58Q96C10 678 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 FAM84AQ96KN4 292 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 ZNF560Q96MR9 790 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 TRMT61BQ9BVS5 477 aaKnown RBP29.38■■■□□ 2.29
LMO1-202ENST00000428101 OSBPL6Q9BZF3 934 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 LRRC27Q9C0I9 530 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 GPR88Q9GZN0 384 aa29.38■■■□□ 2.29
LMO1-202ENST00000428101 ZNF334Q9HCZ1 680 aaPredicted RBP29.38■■■□□ 2.29
LMO1-202ENST00000428101 ZSCAN22P10073 491 aaPredicted RBP29.37■■■□□ 2.29
LMO1-202ENST00000428101 PSMC3P17980 439 aa29.37■■■□□ 2.29
LMO1-202ENST00000428101 POLR2BP30876 1174 aaKnown RBP29.37■■■□□ 2.29
LMO1-202ENST00000428101 HOXD13P35453 343 aa29.37■■■□□ 2.29
LMO1-202ENST00000428101 FOXD4L6Q3SYB3 417 aaPredicted RBP29.37■■■□□ 2.29
LMO1-202ENST00000428101 FOXD4L3Q6VB84 417 aaPredicted RBP29.37■■■□□ 2.29
LMO1-202ENST00000428101 GAREM2Q75VX8 874 aa29.37■■■□□ 2.29
LMO1-202ENST00000428101 THEM5Q8N1Q8 247 aa29.37■■■□□ 2.29
LMO1-202ENST00000428101 BRD9Q9H8M2 597 aa29.37■■■□□ 2.29
LMO1-202ENST00000428101 AGAP1Q9UPQ3 857 aa29.37■■■□□ 2.29
LMO1-202ENST00000428101 COL4A2P08572 1712 aa29.37■■■□□ 2.29
LMO1-202ENST00000428101 TULP1O00294 542 aaPredicted RBP29.36■■■□□ 2.29
LMO1-202ENST00000428101 F13A1P00488 732 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 ITGB3P05106 788 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 PNPLA4P41247 253 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 CNNM4Q6P4Q7 775 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 IQUBQ8NA54 791 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 CACTINQ8WUQ7 758 aaKnown RBP29.36■■■□□ 2.29
LMO1-202ENST00000428101 LPIN3Q9BQK8 851 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 SLITRK6Q9H5Y7 841 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 PDE11AQ9HCR9 933 aa29.36■■■□□ 2.29
LMO1-202ENST00000428101 TICRRQ7Z2Z1 1910 aa29.35■■■□□ 2.29
LMO1-202ENST00000428101 FANCMQ8IYD8 2048 aa29.35■■■□□ 2.29
LMO1-202ENST00000428101 PDIA4P13667 645 aaKnown RBP29.35■■■□□ 2.29
LMO1-202ENST00000428101 ATF6P18850 670 aa29.35■■■□□ 2.29
LMO1-202ENST00000428101 TUFMP49411 452 aaKnown RBP29.35■■■□□ 2.29
LMO1-202ENST00000428101 STXBP5Q5T5C0 1151 aa29.35■■■□□ 2.29
LMO1-202ENST00000428101 MAML2Q8IZL2 1156 aaPredicted RBP29.35■■■□□ 2.29
LMO1-202ENST00000428101 GPD1LQ8N335 351 aa29.35■■■□□ 2.29
LMO1-202ENST00000428101 NOC3LQ8WTT2 800 aaKnown RBP29.35■■■□□ 2.29
LMO1-202ENST00000428101 RSPRY1Q96DX4 576 aa29.35■■■□□ 2.29
LMO1-202ENST00000428101 SEPT5Q99719 369 aaPredicted RBP29.35■■■□□ 2.29
LMO1-202ENST00000428101 MKNK1Q9BUB5 465 aa29.35■■■□□ 2.29
LMO1-202ENST00000428101 PATJQ8NI35 1801 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 SP9P0CG40 484 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 TARSP26639 723 aaKnown RBP29.34■■■□□ 2.29
LMO1-202ENST00000428101 GDI1P31150 447 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 ASIC1P78348 528 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 AMPD3Q01432 767 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 PKP1Q13835 747 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 MGAT5BQ3V5L5 792 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 ZNF852Q6ZMS4 543 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 EPM2AIP1Q7L775 607 aaPredicted RBP29.34■■■□□ 2.29
LMO1-202ENST00000428101 ITIH5Q86UX2 942 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 MFSD6LQ8IWD5 586 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 PDCL2Q8N4E4 241 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 CSGALNACT2Q8N6G5 542 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 C2orf15Q8WU43 125 aaKnown RBP29.34■■■□□ 2.29
LMO1-202ENST00000428101 DEPDC1BQ8WUY9 529 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 IRF7Q92985 503 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 C7orf25Q9BPX7 421 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 BCO2Q9BYV7 579 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 TRPV5Q9NQA5 729 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 SIX4Q9UIU6 781 aa29.34■■■□□ 2.29
LMO1-202ENST00000428101 HEPACAM2A8MVW5 462 aa29.33■■■□□ 2.29
LMO1-202ENST00000428101 SMARCB1Q12824 385 aa29.33■■■□□ 2.29
LMO1-202ENST00000428101 FZD5Q13467 585 aa29.33■■■□□ 2.29
LMO1-202ENST00000428101 STXBP4Q6ZWJ1 553 aa29.33■■■□□ 2.29
LMO1-202ENST00000428101 LRRC52Q8N7C0 313 aa29.33■■■□□ 2.29
LMO1-202ENST00000428101 SPPL2BQ8TCT7 592 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms