RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TMEM191BP0C7N4 346 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 PTPN2P17706 415 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 PCSK1P29120 753 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 GTF2H1P32780 548 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 ZXDAP98168 799 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 MTMR3Q13615 1198 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 CLUL1Q15846 466 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 CFAP221Q4G0U5 840 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 ZCWPW2Q504Y3 356 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 TMEM31Q5JXX7 168 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 RSPO2Q6UXX9 243 aaPredicted RBP9.84□□□□□ -0.83
SMC1A-203ENST00000428014 TMC5Q6UXY8 1006 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 INTS8Q75QN2 995 aaKnown RBP9.84□□□□□ -0.83
SMC1A-203ENST00000428014 MTSS1LQ765P7 747 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 PALB2Q86YC2 1186 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 ZC3H3Q8IXZ2 948 aaKnown RBP9.84□□□□□ -0.83
SMC1A-203ENST00000428014 DCP1BQ8IZD4 617 aaKnown RBP9.84□□□□□ -0.83
SMC1A-203ENST00000428014 KIAA1958Q8N8K9 716 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 PARD3BQ8TEW8 1205 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 FNBP1Q96RU3 617 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 ZCWPW1Q9H0M4 648 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 SLC39A2Q9NP94 309 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 CACNG4Q9UBN1 327 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 R3HCC1Q9Y3T6 440 aaKnown RBP9.84□□□□□ -0.83
SMC1A-203ENST00000428014 INSL5Q9Y5Q6 135 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 MYO10Q9HD67 2058 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 ZNF318Q5VUA4 2279 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 C5orf42Q9H799 3197 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 CYB561D2O14569 222 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 SPTLC1O15269 473 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 PMM2O15305 246 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 ADAM12O43184 909 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 EXOC3O60645 756 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 HUS1O60921 280 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 LRG1P02750 347 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 LAMP2P13473 410 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 PFKLP17858 780 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 ANP32AP39687 249 aaKnown RBP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 MLLT6P55198 1093 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 LRRC63Q05C16 580 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 FOXD4L6Q3SYB3 417 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 ZNF658Q5TYW1 1059 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 IQCEQ6IPM2 695 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 CENPPQ6IPU0 288 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 FOXD4L3Q6VB84 417 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 ITIH5Q86UX2 942 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 CBWD2Q8IUF1 395 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 ELMOD1Q8N336 334 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 TTC39CQ8N584 583 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 TRIML1Q8N9V2 468 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 GLIS3Q8NEA6 775 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 SLC7A14Q8TBB6 771 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 RABGGTAQ92696 567 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 KHSRPQ92945 711 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 SYAP1Q96A49 352 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 E2F7Q96AV8 911 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 B3GALT6Q96L58 329 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 NECAB3Q96P71 396 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-203ENST00000428014 BLZF1Q9H2G9 400 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 GOLPH3LQ9H4A5 285 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 TRPV4Q9HBA0 871 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 PDE11AQ9HCR9 933 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 SIX4Q9UIU6 781 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 CDH7Q9ULB5 785 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 FRMD4BQ9Y2L6 1034 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 TSC2P49815 1807 aa9.83□□□□□ -0.84
SMC1A-203ENST00000428014 CACNA1HO95180 2353 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 C2CD4DB7Z1M9 353 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 STX10O60499 249 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 RFPL2O75678 378 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 NR3C1P04150 777 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 ITGB3P05106 788 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 CPB1P15086 417 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 RPL17P18621 184 aaKnown RBP9.82□□□□□ -0.84
SMC1A-203ENST00000428014 MAGEA11P43364 429 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 UBE2HP62256 183 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 TFAMQ00059 246 aaKnown RBP9.82□□□□□ -0.84
SMC1A-203ENST00000428014 MYL7Q01449 175 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 TDGQ13569 410 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 ZACNQ401N2 412 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 PABPC1LQ4VXU2 614 aaKnown RBP9.82□□□□□ -0.84
SMC1A-203ENST00000428014 VSTM1Q6UX27 236 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 TRIM67Q6ZTA4 783 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 TRAPPC11Q7Z392 1133 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 CSGALNACT2Q8N6G5 542 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 C12orf76Q8N812 135 aaPredicted RBP9.82□□□□□ -0.84
SMC1A-203ENST00000428014 PSMG2Q969U7 264 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 RPGRIP1Q96KN7 1286 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 PIDD1Q9HB75 910 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 TRPV5Q9NQA5 729 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 SLC2A4RGQ9NR83 387 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 OBP2AQ9NY56 170 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 EHD2Q9NZN4 543 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 WNT16Q9UBV4 365 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 DUSP12Q9UNI6 340 aa9.82□□□□□ -0.84
SMC1A-203ENST00000428014 MTMR11A4FU01 709 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 PRRG1O14668 218 aa9.81□□□□□ -0.84
SMC1A-203ENST00000428014 SLC16A3O15427 465 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms