RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 LMBRD2Q68DH5 695 aaPredicted RBP9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 NT5DC4Q86YG4 428 aa9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 C1orf127Q8N9H9 656 aa9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ST13P5Q8NFI4 369 aaPredicted RBP9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ING5Q8WYH8 240 aa9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 AFF4Q9UHB7 1163 aaKnown RBP9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 USP25Q9UHP3 1055 aa9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 C5orf42Q9H799 3197 aa9.95□□□□□ -0.82
RFX3-AS1-202ENST00000427722 PTPRJQ12913 1337 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 FAM237AA0A1B0GTK4 181 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ARHGEF37A1IGU5 675 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ZNF233A6NK53 670 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CYB561D2O14569 222 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CLIC2O15247 247 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 GPR37O15354 613 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KLRC4O43908 158 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 RHOP08100 348 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KRT19P08727 400 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 DLATP10515 647 aaKnown RBP9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 FECHP22830 423 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 PAX3P23760 479 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 PNPLA4P41247 253 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CDR1P51861 262 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 NUCB2P80303 420 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 TWF1Q12792 350 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 BFSP1Q12934 665 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 SNRNP35Q16560 246 aaKnown RBP9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KNOP1Q1ED39 458 aaKnown RBP9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 SV2CQ496J9 727 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 WSCD1Q658N2 575 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 RTL10Q7L3V2 364 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 TCEAL8Q8IYN2 117 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 UBALD2Q8IYN6 164 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KIAA0895Q8NCT3 520 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 OR10T2Q8NGX3 314 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ITFG1Q8TB96 612 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ZNF507Q8TCN5 953 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CACTINQ8WUQ7 758 aaKnown RBP9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 RSAD2Q8WXG1 361 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 PBXIP1Q96AQ6 731 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CCDC127Q96BQ5 260 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 TMEM209Q96SK2 561 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KCNK12Q9HB15 430 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 EPS15L1Q9UBC2 864 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 DNMT3BQ9UBC3 853 aaKnown RBP9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 DSEQ9UL01 958 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CDH7Q9ULB5 785 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 AGAP1Q9UPQ3 857 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 MRPS23Q9Y3D9 190 aaKnown RBP9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 YIPF1Q9Y548 306 aa9.94□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KPNA7A9QM74 516 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 VNN2O95498 520 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 PDGFBP01127 241 aaPredicted RBP9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CYP11A1P05108 521 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 MYL1P05976 194 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 LAMP2P13473 410 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CEBPBP17676 345 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 STK4Q13043 487 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 TDGQ13569 410 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 MYBPC2Q14324 1141 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 SLC5A9Q2M3M2 681 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KRBA2Q6ZNG9 492 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 METTL23Q86XA0 190 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 SUGP1Q8IWZ8 645 aaKnown RBP9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 NPAS3Q8IXF0 933 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ELMOD1Q8N336 334 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CSGALNACT2Q8N6G5 542 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 TTC9BQ8N6N2 239 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 LRRC52Q8N7C0 313 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 XXYLT1Q8NBI6 393 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 RDH13Q8NBN7 331 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ATAD1Q8NBU5 361 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 OR5B17Q8NGF7 314 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 FGF13Q92913 245 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CCDC47Q96A33 483 aaKnown RBP9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ASIC4Q96FT7 647 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ANKRD36BP1Q96IX9 119 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 FNBP1Q96RU3 617 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CORO1BQ9BR76 489 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 OXCT2Q9BYC2 517 aaPredicted RBP9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 KIAA1586Q9HCI6 787 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 IGSF9Q9P2J2 1179 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 SIX4Q9UIU6 781 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 ITGA11Q9UKX5 1188 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 DUSP12Q9UNI6 340 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 R3HCC1Q9Y3T6 440 aaKnown RBP9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 NUMBLQ9Y6R0 609 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 PLXNA3P51805 1871 aa9.93□□□□□ -0.82
RFX3-AS1-202ENST00000427722 MYH15Q9Y2K3 1946 aa9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 MTMR11A4FU01 709 aa9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 GOLGA6L4A6NEF3 574 aa9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 NARSO43776 548 aaKnown RBP9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 EXOC3O60645 756 aa9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 SOAT2O75908 522 aa9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 TNNC2P02585 160 aa9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 RPN1P04843 607 aaKnown RBP9.92□□□□□ -0.82
RFX3-AS1-202ENST00000427722 SNRPFP62306 86 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms