RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 NF2P35240 595 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 EMC2Q15006 297 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 ZBTB41Q5SVQ8 909 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 FEZF2Q8TBJ5 459 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 MAML1Q92585 1016 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 FOXP3Q9BZS1 431 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 RBAKQ9NYW8 714 aaPredicted RBP15.11■□□□□ 0.01
LIG1-202ENST00000427526 FBXO40Q9UH90 709 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 NUB1Q9Y5A7 615 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 ABHD2P08910 425 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 CLTAP09496 248 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 ICAM3P32942 547 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 MAGEA4P43358 317 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 BNIP1Q12981 228 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 NFX1Q12986 1120 aaKnown RBP15.11■□□□□ 0.01
LIG1-202ENST00000427526 STRN3Q13033 797 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 RIPK1Q13546 671 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 CCDC142Q17RM4 750 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 ATP13A4Q4VNC1 1196 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 EAPPQ56P03 285 aaPredicted RBP15.11■□□□□ 0.01
LIG1-202ENST00000427526 CGB2Q6NT52 195 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 SPATA21Q7Z572 469 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 RBBP8NLQ8NC74 664 aaPredicted RBP15.11■□□□□ 0.01
LIG1-202ENST00000427526 GDAP1Q8TB36 358 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 OPTNQ96CV9 577 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 MAGEB18Q96M61 343 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 RBM15Q96T37 977 aaKnown RBP eCLIP15.11■□□□□ 0.018e-6■□□□□ 8.4
LIG1-202ENST00000427526 PARVAQ9NVD7 372 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 GGT7Q9UJ14 662 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 USTQ9Y2C2 406 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 CNTNAP2Q9UHC6 1331 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 CXCL11O14625 94 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 LIASO43766 372 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 NCALDP61601 193 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 MKRN3Q13064 507 aaKnown RBP15.11■□□□□ 0.01
LIG1-202ENST00000427526 P3H1Q32P28 736 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 SCARA3Q6AZY7 606 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 DRICH1Q6PGQ1 229 aaPredicted RBP15.11■□□□□ 0.01
LIG1-202ENST00000427526 ARHGEF18Q6ZSZ5 1173 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 GLIS1Q8NBF1 620 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 ASAP3Q8TDY4 903 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 TMEM143Q96AN5 459 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 CCDC77Q9BR77 488 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 PORCNQ9H237 461 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 ARL2BPQ9Y2Y0 163 aa15.11■□□□□ 0.01
LIG1-202ENST00000427526 LCTP09848 1927 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 A0A0B4J269 797 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 POTEJP0CG39 1038 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 TCF4P15884 667 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 UBA1P22314 1058 aaKnown RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 MMP8P22894 467 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 GLRA2P23416 452 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 TBXAS1P24557 533 aaPredicted RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 GCAP28676 217 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 MAP2K2P36507 400 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 RPL7AP62424 266 aaKnown RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 LMNB2Q03252 620 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 SLFN12LQ6IEE8 588 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 PPP1R2P3Q6NXS1 205 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 USP50Q70EL3 339 aaPredicted RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 TBC1D1Q86TI0 1168 aaPredicted RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 RPAINQ86UA6 219 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 SRRM1Q8IYB3 904 aaKnown RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 RCOR2Q8IZ40 523 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 GBP7Q8N8V2 638 aaPredicted RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 TGS1Q96RS0 853 aaKnown RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 NOD2Q9HC29 1040 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 ZNF302Q9NR11 478 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 RBPJLQ9UBG7 517 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 IP6K2Q9UHH9 426 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 PTPRFP10586 1907 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 ADGRA2Q96PE1 1338 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 OTOFQ9HC10 1997 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 TMEM191CA6NGB0 347 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 TMEM191BP0C7N4 346 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 SLC8A1P32418 973 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 ZNF132P52740 706 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 MOGSQ13724 837 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 ZNF606Q8WXB4 792 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 SLITRK1Q96PX8 696 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 CGRRF1Q99675 332 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 TACO1Q9BSH4 297 aaKnown RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 MAF1Q9H063 256 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 DHX33Q9H6R0 707 aaKnown RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 MCM8Q9UJA3 840 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 DNPEPQ9ULA0 475 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 AGTPBP1Q9UPW5 1226 aa15.1■□□□□ 0.01
LIG1-202ENST00000427526 MAFBQ9Y5Q3 323 aaPredicted RBP15.1■□□□□ 0.01
LIG1-202ENST00000427526 TCRBV5S1A1TA0A578 114 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 ATG7O95352 703 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 LDHAP00338 332 aaKnown RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 EDN1P05305 212 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 KRT10P13645 584 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 STX2P32856 288 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 ARL2P36404 184 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 NAMPTP43490 491 aa15.09■□□□□ 0.01
LIG1-202ENST00000427526 POLGP54098 1239 aaPredicted RBP15.09■□□□□ 0.01
LIG1-202ENST00000427526 NOP14P78316 857 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms