RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 ITGB3P05106 788 aa20.65■□□□□ 0.9
HCG18-235ENST00000426882 ZNF507Q8TCN5 953 aa20.65■□□□□ 0.9
HCG18-235ENST00000426882 TMC2Q8TDI7 906 aa20.65■□□□□ 0.9
HCG18-235ENST00000426882 GIPC2Q8TF65 315 aa20.65■□□□□ 0.9
HCG18-235ENST00000426882 MAP3K20Q9NYL2 800 aaKnown RBP20.65■□□□□ 0.9
HCG18-235ENST00000426882 RARGP13631 454 aa20.64■□□□□ 0.9
HCG18-235ENST00000426882 EFTUD2Q15029 972 aaKnown RBP eCLIP20.64■□□□□ 0.91e-9■■■□□ 14.8
HCG18-235ENST00000426882 URGCPQ8TCY9 931 aa20.64■□□□□ 0.9
HCG18-235ENST00000426882 CCDC78A2IDD5 438 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 ZC3H11AO75152 810 aaKnown RBP eCLIP20.64■□□□□ 0.89
HCG18-235ENST00000426882 ZNF189O75820 626 aaPredicted RBP20.64■□□□□ 0.89
HCG18-235ENST00000426882 CACNB2Q08289 660 aaPredicted RBP20.64■□□□□ 0.89
HCG18-235ENST00000426882 MYBPC2Q14324 1141 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 SLC47A2Q86VL8 602 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 MRPL40Q9NQ50 206 aaKnown RBP20.64■□□□□ 0.89
HCG18-235ENST00000426882 RIMS1Q86UR5 1692 aaKnown RBP20.64■□□□□ 0.89
HCG18-235ENST00000426882 HIC1Q14526 733 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 MEA1Q16626 185 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 SLC35C1Q96A29 364 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 KRT82Q9NSB4 513 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.64■□□□□ 0.89
HCG18-235ENST00000426882 DNAJC3Q13217 504 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 SV2AQ7L0J3 742 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 LONP2Q86WA8 852 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 C4orf19Q8IY42 314 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 FAM163AQ96GL9 167 aaPredicted RBP20.64■□□□□ 0.89
HCG18-235ENST00000426882 MTMR12Q9C0I1 747 aa20.64■□□□□ 0.89
HCG18-235ENST00000426882 ZSCAN5CA6NGD5 496 aaPredicted RBP20.63■□□□□ 0.89
HCG18-235ENST00000426882 PFDN1O60925 122 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 CAVIN3Q969G5 261 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 LBHD1Q9BQE6 289 aaPredicted RBP20.63■□□□□ 0.89
HCG18-235ENST00000426882 PDCD2LQ9BRP1 358 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 YIPF3Q9GZM5 350 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 UBA6A0AVT1 1052 aaPredicted RBP20.63■□□□□ 0.89
HCG18-235ENST00000426882 NAMPTP43490 491 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 GOLGA7BQ2TAP0 167 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 SYTL5Q8TDW5 730 aaPredicted RBP20.63■□□□□ 0.89
HCG18-235ENST00000426882 CD4P01730 458 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 ITGA4P13612 1032 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 DTX3LQ8TDB6 740 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 HDAC7Q8WUI4 952 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 INTS13Q9NVM9 706 aa20.63■□□□□ 0.89
HCG18-235ENST00000426882 CAND2O75155 1236 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 SUPT20HL2P0C7V6 817 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 PCNX4Q63HM2 1172 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 PRPF31Q8WWY3 499 aaKnown RBP20.62■□□□□ 0.89
HCG18-235ENST00000426882 RIC1Q4ADV7 1423 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 CTCFP49711 727 aaPredicted RBP20.62■□□□□ 0.89
HCG18-235ENST00000426882 EP400NLQ6ZTU2 488 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 NDUFAF2Q8N183 169 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 USP33Q8TEY7 942 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 MGEA5O60502 916 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 BOLA3Q53S33 107 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 ANO5Q75V66 913 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 AGO4Q9HCK5 861 aaKnown RBP20.62■□□□□ 0.89
HCG18-235ENST00000426882 EEF2KO00418 725 aaKnown RBP20.62■□□□□ 0.89
HCG18-235ENST00000426882 GAS2O43903 313 aaKnown RBP20.62■□□□□ 0.89
HCG18-235ENST00000426882 SLITRK3O94933 977 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 GEMIN4P57678 1058 aaKnown RBP20.62■□□□□ 0.89
HCG18-235ENST00000426882 CYP24A1Q07973 514 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 ZNF235Q14590 738 aa20.62■□□□□ 0.89
HCG18-235ENST00000426882 CPB1P15086 417 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 BACE1P56817 501 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 SNAPC2Q13487 334 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 SLC15A2Q16348 729 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 DCAF6Q58WW2 860 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 PARD3BQ8TEW8 1205 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 GCNAQ96QF7 691 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 CTSHP09668 335 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 KCND1Q9NSA2 647 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 E5RI56 91 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 SASH3O75995 380 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 CYP2C9P11712 490 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 ACADSBP45954 432 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 NLRP11P59045 1033 aaKnown RBP20.61■□□□□ 0.89
HCG18-235ENST00000426882 PPP1R36Q96LQ0 422 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 MTMR9Q96QG7 549 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 TSPYL2Q9H2G4 693 aaPredicted RBP20.61■□□□□ 0.89
HCG18-235ENST00000426882 SLC40A1Q9NP59 571 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 RNF103-CHMP3A0A140T963 221 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 PYGBP11216 843 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 RARRES1P49788 294 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 ORC1Q13415 861 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 NCLNQ969V3 563 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 CDC42EP4Q9H3Q1 356 aaKnown RBP20.61■□□□□ 0.89
HCG18-235ENST00000426882 SLC8A2Q9UPR5 921 aa20.61■□□□□ 0.89
HCG18-235ENST00000426882 TNPO2O14787 897 aaKnown RBP20.6■□□□□ 0.89
HCG18-235ENST00000426882 STIP1P31948 543 aaKnown RBP20.6■□□□□ 0.89
HCG18-235ENST00000426882 PDK1Q15118 436 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 KCNT1Q5JUK3 1230 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 OTOP1Q7RTM1 612 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 ULK4Q96C45 1275 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 WHRNQ9P202 907 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 POLIQ9UNA4 740 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 VCAM1P19320 739 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 TEDDM1Q5T9Z0 273 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 PPHLN1Q8NEY8 458 aaKnown RBP20.6■□□□□ 0.89
HCG18-235ENST00000426882 RGL2O15211 777 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 PROSCO94903 275 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms