RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
USP42-203ENST00000426246 RBBP8NLQ8NC74 664 aaPredicted RBP14.14□□□□□ -0.15
USP42-203ENST00000426246 TRAPPC12Q8WVT3 735 aa14.14□□□□□ -0.15
USP42-203ENST00000426246 IQCGQ9H095 443 aaKnown RBP14.14□□□□□ -0.15
USP42-203ENST00000426246 ELP3Q9H9T3 547 aa14.14□□□□□ -0.15
USP42-203ENST00000426246 A1CFQ9NQ94 594 aaKnown RBP14.14□□□□□ -0.15
USP42-203ENST00000426246 HOXC10Q9NYD6 342 aa14.14□□□□□ -0.15
USP42-203ENST00000426246 BTBD7Q9P203 1132 aa14.14□□□□□ -0.15
USP42-203ENST00000426246 PCDHA10Q9Y5I2 948 aa14.14□□□□□ -0.15
USP42-203ENST00000426246 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
USP42-203ENST00000426246 ATP6V1G2O95670 118 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 ELF1P32519 619 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 VSIG10LQ86VR7 867 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 RUBCNQ92622 972 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 TRABDQ9H4I3 376 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 G3BP2Q9UN86 482 aaKnown RBP14.13□□□□□ -0.15
USP42-203ENST00000426246 CHMP2BQ9UQN3 213 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 MUTP22033 750 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 IREB2P48200 963 aaKnown RBP14.13□□□□□ -0.15
USP42-203ENST00000426246 KIF22Q14807 665 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 PPP6R3Q5H9R7 873 aaPredicted RBP14.13□□□□□ -0.15
USP42-203ENST00000426246 C1orf228Q6PIY5 440 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 RFX6Q8HWS3 928 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 CCT6BQ92526 530 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 MTMR12Q9C0I1 747 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 TJP2Q9UDY2 1190 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 ADGRA3Q8IWK6 1321 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 GTPBP10A4D1E9 387 aaKnown RBP14.13□□□□□ -0.15
USP42-203ENST00000426246 ENO4A6NNW6 628 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 LGR5O75473 907 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 TNFSF9P41273 254 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 PPP2R5EQ16537 467 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 ERICH1Q86X53 443 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 CCDC60Q8IWA6 550 aaPredicted RBP14.13□□□□□ -0.15
USP42-203ENST00000426246 ATL2Q8NHH9 583 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 PYROXD1Q8WU10 500 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 SLC7A3Q8WY07 619 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 CYTH2Q99418 400 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 YIPF3Q9GZM5 350 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 EPB41L4BQ9H329 900 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 R3HDMLQ9H3Y0 253 aa14.13□□□□□ -0.15
USP42-203ENST00000426246 CNMDO75829 334 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 TTC4O95801 387 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 PECAM1P16284 738 aaPredicted RBP14.12□□□□□ -0.15
USP42-203ENST00000426246 KRT4P19013 534 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 GCKP35557 465 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 IL9RQ01113 521 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 CNTN2Q02246 1040 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 SGSM1Q2NKQ1 1148 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 ANKRD13AQ8IZ07 590 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 FITM2Q8N6M3 262 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 AGR3Q8TD06 166 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.12□□□□□ -0.15
USP42-203ENST00000426246 MAML1Q92585 1016 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 CSADQ9Y600 493 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 ARID2Q68CP9 1835 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 CCDC78A2IDD5 438 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 H7C0C1 242 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 ZNF862O60290 1169 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
USP42-203ENST00000426246 GJA5P36382 358 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 ATP5OP48047 213 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 RGS7P49802 495 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 PEX5P50542 639 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 BMT2Q1RMZ1 405 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 C1orf220Q5T0J3 134 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 ERO1BQ86YB8 467 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 MCOLN2Q8IZK6 566 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 CEP120Q8N960 986 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 LMO3Q8TAP4 145 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 PCDHA3Q9Y5H8 950 aa14.12□□□□□ -0.15
USP42-203ENST00000426246 PSMA2P25787 234 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 ARHGEF18Q6ZSZ5 1173 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 ZC3H3Q8IXZ2 948 aaKnown RBP14.11□□□□□ -0.15
USP42-203ENST00000426246 FAM71AQ8IYT1 594 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 TMEM161BQ8NDZ6 487 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 PPP1R14CQ8TAE6 165 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 OTUD5Q96G74 571 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 MAF1Q9H063 256 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 GPATCH2LQ9NWQ4 482 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 SNX3O60493 162 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 TMEM191BP0C7N4 346 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 POU5F1Q01860 360 aaKnown RBP14.11□□□□□ -0.15
USP42-203ENST00000426246 TAF11Q15544 211 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 LRRC36Q1X8D7 754 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 LDLRAD1Q5T700 205 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 UBA3Q8TBC4 463 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 ATXN7L3BQ96GX2 97 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 APOL6Q9BWW8 343 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 NOCTQ9UK39 431 aaKnown RBP14.11□□□□□ -0.15
USP42-203ENST00000426246 RPA3P35244 121 aaPredicted RBP14.11□□□□□ -0.15
USP42-203ENST00000426246 CYP24A1Q07973 514 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 FSTL1Q12841 308 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 WDR72Q3MJ13 1102 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 GPAT2Q6NUI2 795 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 C11orf63Q6NUN7 778 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 FAM71DQ8N9W8 422 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms