RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 HSD3B7Q9H2F3 369 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 VWA8A3KMH1 1905 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 FSD2A1L4K1 749 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 OR6C75A6NL08 312 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 GABRDO14764 452 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 GLP2RO95838 553 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 MAN2A1Q16706 1144 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 LLGL2Q6P1M3 1020 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 LILRA6Q6PI73 481 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 OSTM1Q86WC4 334 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 THEM5Q8N1Q8 247 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 SPATA18Q8TC71 538 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 PABPC5Q96DU9 382 aaKnown RBP26.24■■□□□ 1.79
VEGFA-209ENST00000425836 SMTNL1A8MU46 457 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 FAM163BP0C2L3 166 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 EPCAMP16422 314 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 IQCB1Q15051 598 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 CCDC150Q8NCX0 1101 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 OR10T2Q8NGX3 314 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 MRPL45Q9BRJ2 306 aaKnown RBP26.23■■□□□ 1.79
VEGFA-209ENST00000425836 SMYD3Q9H7B4 428 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 CLDND1Q9NY35 253 aa26.23■■□□□ 1.79
VEGFA-209ENST00000425836 TGM5O43548 720 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 TACC1O75410 805 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 GLUD1P00367 558 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 C1RP00736 705 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 P4HA1P13674 534 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 ZNF18P17022 549 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 WARSP23381 471 aaKnown RBP26.22■■□□□ 1.79
VEGFA-209ENST00000425836 LHX1P48742 406 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 CDH8P55286 799 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 ARPP19P56211 112 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 ROR1Q01973 937 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 CETN1Q12798 172 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 VWA3BQ502W6 1294 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 WDR44Q5JSH3 913 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 MIIPQ5JXC2 388 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 TMEM184AQ6ZMB5 413 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 LMO3Q8TAP4 145 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 TMEM209Q96SK2 561 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 CBX8Q9HC52 389 aa26.22■■□□□ 1.79
VEGFA-209ENST00000425836 DDX43Q9NXZ2 648 aaKnown RBP26.22■■□□□ 1.79
VEGFA-209ENST00000425836 CAVIN2O95810 425 aa26.21■■□□□ 1.79
VEGFA-209ENST00000425836 PRKCSHP14314 528 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-209ENST00000425836 LTBRP36941 435 aa26.21■■□□□ 1.79
VEGFA-209ENST00000425836 ASPAP45381 313 aa26.21■■□□□ 1.79
VEGFA-209ENST00000425836 SCARA5Q6ZMJ2 495 aa26.21■■□□□ 1.79
VEGFA-209ENST00000425836 SDCBP2Q9H190 292 aa26.21■■□□□ 1.79
VEGFA-209ENST00000425836 WDR27A2RRH5 827 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 HCRTO43612 131 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 OR4Q2P0C623 313 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 SPATA31D3P0C874 917 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 KRT31Q15323 416 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 LRSAM1Q6UWE0 723 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 EP400NLQ6ZTU2 488 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 SPATA31D4Q6ZUB0 917 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 EHBP1Q8NDI1 1231 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 CASP10Q92851 521 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 TATDN2Q93075 761 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 BCO2Q9BYV7 579 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 NIF3L1Q9GZT8 377 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 NDST4Q9H3R1 872 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 TAB2Q9NYJ8 693 aa26.2■■□□□ 1.79
VEGFA-209ENST00000425836 EYSQ5T1H1 3165 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-209ENST00000425836 ABLIM3O94929 683 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 LMO2P25791 158 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 RAP1GAPP47736 663 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 DLX2Q07687 328 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-209ENST00000425836 ZNF461Q8TAF7 563 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 ACBD6Q9BR61 282 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 ZCWPW1Q9H0M4 648 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 CLEC1BQ9P126 229 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 BARX2Q9UMQ3 279 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-209ENST00000425836 NME7Q9Y5B8 376 aa26.2■■□□□ 1.78
VEGFA-209ENST00000425836 BECN2A8MW95 431 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 TBX10O75333 385 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 WEE2P0C1S8 567 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 CPB1P15086 417 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 ACAT1P24752 427 aaKnown RBP26.19■■□□□ 1.78
VEGFA-209ENST00000425836 GNL1P36915 607 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-209ENST00000425836 GPR17Q13304 367 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 OR6B3Q8NGW1 331 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 FAXDC2Q96IV6 333 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 SNX25Q9H3E2 840 aa26.19■■□□□ 1.78
VEGFA-209ENST00000425836 UBE2ZQ9H832 354 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-209ENST00000425836 LIMA1Q9UHB6 759 aaKnown RBP26.19■■□□□ 1.78
VEGFA-209ENST00000425836 REV3LO60673 3130 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 PDGFRBP09619 1106 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 CDK11BP21127 795 aaKnown RBP26.18■■□□□ 1.78
VEGFA-209ENST00000425836 RNF19BQ6ZMZ0 732 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 LUZP1Q86V48 1076 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 LRRTM3Q86VH5 581 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 KREMEN2Q8NCW0 462 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 HLA-CQ95604 372 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 CRACR2AQ9BSW2 395 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 CYP3A43Q9HB55 503 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 PRDM6Q9NQX0 595 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 MAN1C1Q9NR34 630 aa26.18■■□□□ 1.78
VEGFA-209ENST00000425836 FBXW11Q9UKB1 542 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms