RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 RSPH1Q8WYR4 309 aa16.84■□□□□ 0.29
SCRN1-205ENST00000425819 SYT11Q9BT88 431 aa16.84■□□□□ 0.29
SCRN1-205ENST00000425819 CXXC1Q9P0U4 656 aaPredicted RBP16.84■□□□□ 0.29
SCRN1-205ENST00000425819 A0A087X0T9 212 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 EIF3CLB5ME19 914 aaKnown RBP16.83■□□□□ 0.28
SCRN1-205ENST00000425819 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.281e-7■■□□□ 12.1
SCRN1-205ENST00000425819 NRP1O14786 923 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 THAP12O43422 761 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 HCRTO43612 131 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 TACC1O75410 805 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 MMEP08473 750 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 FAM228BP0C875 321 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 CHRNB2P17787 502 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 PBX3P40426 434 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 CYP27A1Q02318 531 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 LIMS2Q7Z4I7 341 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 TTC39CQ8N584 583 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 SLC4A11Q8NBS3 891 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 OLIG1Q8TAK6 271 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 LNX1Q8TBB1 728 aaPredicted RBP16.83■□□□□ 0.28
SCRN1-205ENST00000425819 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
SCRN1-205ENST00000425819 TMEM176AQ96HP8 235 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 EIF3CQ99613 913 aaKnown RBP16.83■□□□□ 0.28
SCRN1-205ENST00000425819 SNX25Q9H3E2 840 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 NME7Q9Y5B8 376 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 TIMM13Q9Y5L4 95 aaPredicted RBP16.83■□□□□ 0.28
SCRN1-205ENST00000425819 ADGRG1Q9Y653 693 aa16.83■□□□□ 0.28
SCRN1-205ENST00000425819 FAM170AA1A519 330 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 ZNF263O14978 683 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 ALDH2P05091 517 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 CD19P15391 556 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 BRD2P25440 801 aaKnown RBP16.82■□□□□ 0.28
SCRN1-205ENST00000425819 SSTR3P32745 418 aaPredicted RBP16.82■□□□□ 0.28
SCRN1-205ENST00000425819 GNL1P36915 607 aaPredicted RBP16.82■□□□□ 0.28
SCRN1-205ENST00000425819 CDR2Q01850 454 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 SPA17Q15506 151 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 SLC18A3Q16572 532 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 DPH6Q7L8W6 267 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 OSTM1Q86WC4 334 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 ZNF689Q96CS4 500 aaPredicted RBP16.82■□□□□ 0.28
SCRN1-205ENST00000425819 NT5C1AQ9BXI3 368 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 FAM124BQ9H5Z6 455 aaPredicted RBP16.82■□□□□ 0.28
SCRN1-205ENST00000425819 TRMT1Q9NXH9 659 aaKnown RBP16.82■□□□□ 0.28
SCRN1-205ENST00000425819 FAN1Q9Y2M0 1017 aa16.82■□□□□ 0.28
SCRN1-205ENST00000425819 REXO2Q9Y3B8 237 aaKnown RBP16.82■□□□□ 0.28
SCRN1-205ENST00000425819 A8MXQ7 604 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 NT5C1B-RDH14C9J2C7 533 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 TMEM189-UBE2V1I3L0A0 370 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 TADA2AO75478 443 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 GALTP07902 379 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 PAEPP09466 180 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 PDGFRBP09619 1106 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 ODC1P11926 461 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 WARSP23381 471 aaKnown RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 MSNP26038 577 aaKnown RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 ANXA13P27216 316 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 FMO1Q01740 532 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 BMS1Q14692 1282 aaKnown RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 PALB2Q86YC2 1186 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 HERVK_113Q902F9 699 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 TFAP2BQ92481 460 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 PCDHB18PQ96TA0 734 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 YME1L1Q96TA2 773 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 ZSWIM1Q9BR11 485 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 TMEM175Q9BSA9 504 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 COLEC11Q9BWP8 271 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 CWH43Q9H720 699 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 RC3H2Q9HBD1 1191 aaKnown RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 PPP2R2CQ9Y2T4 447 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 M0QZQ0 153 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 CCDC175P0C221 793 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 PAX3P23760 479 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 LMO2P25791 158 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 BCAR1P56945 870 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 BTG3Q14201 252 aaPredicted RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 SPOUT1Q5T280 376 aaKnown RBP16.81■□□□□ 0.28
SCRN1-205ENST00000425819 ACOT1Q86TX2 421 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 UNC93AQ86WB7 457 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 TMEM86AQ8N2M4 240 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 SLC30A5Q8TAD4 765 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 ZNF606Q8WXB4 792 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 SUSD3Q96L08 255 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 PDCL3Q9H2J4 239 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 DPEP3Q9H4B8 488 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
SCRN1-205ENST00000425819 COL4A6Q14031 1691 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 USP27XA6NNY8 438 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 TMCO5BA8MYB1 307 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 LCA5LO95447 670 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 CFHP08603 1231 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 FAM163BP0C2L3 166 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 KRT83P78385 493 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 SMYD5Q6GMV2 418 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 METTL23Q86XA0 190 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 ZNF677Q86XU0 584 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 DNAAF5Q86Y56 855 aa16.8■□□□□ 0.28
SCRN1-205ENST00000425819 CMTR2Q8IYT2 770 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms