RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 UMODL1Q5DID0 1318 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 ZSWIM8A7E2V4 1837 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 H0YCG3 227 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 THAP12O43422 761 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 ZC3H11AO75152 810 aaKnown RBP eCLIP11.32□□□□□ -0.63e-6■■■■□ 25.7
CUX1-205ENST00000425244 GH1P01241 217 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 PAEPP09466 180 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 GNA15P30679 374 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 DRP2Q13474 957 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 MAMDC4Q6UXC1 1216 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 C15orf39Q6ZRI6 1047 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 TAX1BP1Q86VP1 789 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
CUX1-205ENST00000425244 PWWP2AQ96N64 755 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 HAPLN2Q9GZV7 340 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 KATNBL1Q9H079 304 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 CDC42EP4Q9H3Q1 356 aaKnown RBP11.32□□□□□ -0.6
CUX1-205ENST00000425244 APOBEC3GQ9HC16 384 aaKnown RBP11.32□□□□□ -0.6
CUX1-205ENST00000425244 NRBP2Q9NSY0 501 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 INTS9Q9NV88 658 aaKnown RBP11.32□□□□□ -0.6
CUX1-205ENST00000425244 GABRQQ9UN88 632 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 ATXN2Q99700 1313 aaKnown RBP11.32□□□□□ -0.6
CUX1-205ENST00000425244 VNN1O95497 513 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 GAS8O95995 478 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 ATF2P15336 505 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 CD58P19256 250 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 DRD4P21917 467 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 GLRA2P23416 452 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 APLP1P51693 650 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 RTP1P59025 263 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 BPIFB4P59827 614 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 TNFAIP2Q03169 654 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 CUL2Q13617 745 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 OR6J1Q8NGC5 347 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 RNF217Q8TC41 542 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 TRIM11Q96F44 468 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 PRMT1Q99873 361 aaKnown RBP11.32□□□□□ -0.6
CUX1-205ENST00000425244 KIAA1586Q9HCI6 787 aa11.32□□□□□ -0.6
CUX1-205ENST00000425244 IGKV6D-21A0A0A0MT36 114 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 KIF1CO43896 1103 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 AGTP01019 485 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 C4BPAP04003 597 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 GJB1P08034 283 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 MYBL1P10243 752 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 RGS2P41220 211 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 MMP13P45452 471 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 ITGA8P53708 1063 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 AUHQ13825 339 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 SCARA3Q6AZY7 606 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 PRUNE1Q86TP1 453 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 OR5B17Q8NGF7 314 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 SCLT1Q96NL6 688 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 FOXO6A8MYZ6 492 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 PROSCO94903 275 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 SLC1A1P43005 524 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 TAS2R40P59535 323 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 NOP14P78316 857 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 CAP1Q01518 475 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 CENPCQ03188 943 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 LRRC14Q15048 493 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 SPRED3Q2MJR0 410 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 KAZNQ674X7 775 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 C6orf89Q6UWU4 347 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 CRELD2Q6UXH1 353 aaPredicted RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 MON1BQ7L1V2 547 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 YTHDF3Q7Z739 585 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 CCDC13Q8IYE1 715 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 SNF8Q96H20 258 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 FAM81BQ96LP2 452 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 TCHPQ9BT92 498 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 DCLK3Q9C098 648 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 MLXIPLQ9NP71 852 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 AAASQ9NRG9 546 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
CUX1-205ENST00000425244 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
CUX1-205ENST00000425244 PI4K2BG5E9Z4 385 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 FSBPO95073 299 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
CUX1-205ENST00000425244 LGALS2P05162 132 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 FLT3LGP49771 235 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 MCCD1P59942 119 aaPredicted RBP11.3□□□□□ -0.6
CUX1-205ENST00000425244 LACTBP83111 547 aaPredicted RBP11.3□□□□□ -0.6
CUX1-205ENST00000425244 PRKCZQ05513 592 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 PLCB4Q15147 1175 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 KYNUQ16719 465 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 OLFML2BQ68BL8 750 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 GSTA5Q7RTV2 222 aa11.3□□□□□ -0.6
CUX1-205ENST00000425244 ZNF677Q86XU0 584 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms