RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 LINC01565O15544 149 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 ADAM12O43184 909 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 GLP2RO95838 553 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 C1RP00736 705 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 LHX1P48742 406 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 ROR1Q01973 937 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 ADAM15Q13444 863 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 KCNC3Q14003 757 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 RAB33AQ14088 237 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 MAN2A1Q16706 1144 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 CTC1Q2NKJ3 1217 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 TCP11X2Q5H9J9 407 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 CDKAL1Q5VV42 579 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 SPOPLQ6IQ16 392 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 VN1R2Q8NFZ6 395 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 SLC22A17Q8WUG5 538 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 SEMA4DQ92854 862 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 ELMO3Q96BJ8 720 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.5■■□□□ 1.35
HMGA2-205ENST00000425208 FANCLQ9NW38 375 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 POLIQ9UNA4 740 aa23.5■■□□□ 1.35
HMGA2-205ENST00000425208 PRUNE2Q8WUY3 3088 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 TGM5O43548 720 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 TACC1O75410 805 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 CAVIN2O95810 425 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 PRKCSHP14314 528 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-205ENST00000425208 CPB1P15086 417 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 EPCAMP16422 314 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 ARPP19P56211 112 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 WDR44Q5JSH3 913 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 ELMSAN1Q6PJG2 1045 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 TMEM184AQ6ZMB5 413 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 SCARA5Q6ZMJ2 495 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 TUBGCP2Q9BSJ2 902 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 DDX43Q9NXZ2 648 aaKnown RBP23.49■■□□□ 1.35
HMGA2-205ENST00000425208 DPP7Q9UHL4 492 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 XIRP2A4UGR9 3374 aa23.49■■□□□ 1.35
HMGA2-205ENST00000425208 SMTNL1A8MU46 457 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 FAM163BP0C2L3 166 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 RBM10P98175 930 aaKnown RBP23.48■■□□□ 1.35
HMGA2-205ENST00000425208 NCAPHQ15003 741 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 OR10T2Q8NGX3 314 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 KBTBD7Q8WVZ9 684 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 HLA-CQ95604 372 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 RTP3Q9BQQ7 232 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 NIF3L1Q9GZT8 377 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 SMYD3Q9H7B4 428 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 UBE2ZQ9H832 354 aaPredicted RBP23.48■■□□□ 1.35
HMGA2-205ENST00000425208 APOBEC3GQ9HC16 384 aaKnown RBP23.48■■□□□ 1.35
HMGA2-205ENST00000425208 COG5Q9UP83 839 aa23.48■■□□□ 1.35
HMGA2-205ENST00000425208 WDR27A2RRH5 827 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 SPDYE4A6NLX3 237 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 BECN2A8MW95 431 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 GABRDO14764 452 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 LRRN2O75325 713 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 TBX10O75333 385 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 WARSP23381 471 aaKnown RBP23.47■■□□□ 1.35
HMGA2-205ENST00000425208 ASPAP45381 313 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 DHX40Q8IX18 779 aaKnown RBP23.47■■□□□ 1.35
HMGA2-205ENST00000425208 ANKRD20A12PQ8NF67 263 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 ZNF461Q8TAF7 563 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 SNX25Q9H3E2 840 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 MAN1C1Q9NR34 630 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 DZANK1Q9NVP4 752 aa23.47■■□□□ 1.35
HMGA2-205ENST00000425208 BARX2Q9UMQ3 279 aaPredicted RBP23.47■■□□□ 1.35
HMGA2-205ENST00000425208 PCSK1P29120 753 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 TSPY1Q01534 308 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 TPGS2Q68CL5 300 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 LILRA6Q6PI73 481 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 OSTM1Q86WC4 334 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 FAXDC2Q96IV6 333 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 ACBD6Q9BR61 282 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 MRPL45Q9BRJ2 306 aaKnown RBP23.46■■□□□ 1.35
HMGA2-205ENST00000425208 PLEKHA4Q9H4M7 779 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 FBXW11Q9UKB1 542 aa23.46■■□□□ 1.35
HMGA2-205ENST00000425208 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.45■■□□□ 1.34
HMGA2-205ENST00000425208 TPM2P07951 284 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 OR4Q2P0C623 313 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 LTBRP36941 435 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 RAP1GAPP47736 663 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 VWA3BQ502W6 1294 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 KREMEN2Q8NCW0 462 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 OR6B3Q8NGW1 331 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 HDAC7Q8WUI4 952 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 TMEM209Q96SK2 561 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 BCO2Q9BYV7 579 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 ZCWPW1Q9H0M4 648 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 NDST4Q9H3R1 872 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 GCNT4Q9P109 453 aa23.45■■□□□ 1.34
HMGA2-205ENST00000425208 PES1O00541 588 aaKnown RBP23.44■■□□□ 1.34
HMGA2-205ENST00000425208 ABLIM3O94929 683 aa23.44■■□□□ 1.34
HMGA2-205ENST00000425208 SPATA31D3P0C874 917 aa23.44■■□□□ 1.34
HMGA2-205ENST00000425208 CDK11BP21127 795 aaKnown RBP23.44■■□□□ 1.34
HMGA2-205ENST00000425208 KCNA5P22460 613 aa23.44■■□□□ 1.34
HMGA2-205ENST00000425208 ACAT1P24752 427 aaKnown RBP23.44■■□□□ 1.34
HMGA2-205ENST00000425208 GNL1P36915 607 aaPredicted RBP23.44■■□□□ 1.34
HMGA2-205ENST00000425208 CDH8P55286 799 aa23.44■■□□□ 1.34
HMGA2-205ENST00000425208 DLX2Q07687 328 aaPredicted RBP23.44■■□□□ 1.34
HMGA2-205ENST00000425208 GPR17Q13304 367 aa23.44■■□□□ 1.34
HMGA2-205ENST00000425208 LIN9Q5TKA1 542 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms