RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 CEP120Q8N960 986 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 RNF169Q8NCN4 708 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 BEST2Q8NFU1 509 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 PARD3BQ8TEW8 1205 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 SAAL1Q96ER3 474 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 UROC1Q96N76 676 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 SAMD11Q96NU1 681 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 FAM193BQ96PV7 902 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 YME1L1Q96TA2 773 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 DUSP9Q99956 384 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 SRRTQ9BXP5 876 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 HAPLN2Q9GZV7 340 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 PCIF1Q9H4Z3 704 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 SNTG2Q9NY99 539 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 UBQLN1Q9UMX0 589 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 R3HCC1Q9Y3T6 440 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 NFE2L3Q9Y4A8 694 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 PCDHA11Q9Y5I1 949 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 PDCD11Q14690 1871 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 FNDC1Q4ZHG4 1894 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 ANK1P16157 1881 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 SMIM28A0A1B0GU29 152 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ARHGEF37A1IGU5 675 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 P4HA2O15460 535 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 OFD1O75665 1012 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TNNC2P02585 160 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 LAG3P18627 525 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TNNI1P19237 187 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 AKAP5P24588 427 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 PPM1AP35813 382 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 MLH1P40692 756 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 PNPLA4P41247 253 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TNFSF9P41273 254 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 VAMP7P51809 220 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 STX17P56962 302 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 OSTNP61366 133 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 DEFB103AP81534 67 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 RNASELQ05823 741 aaKnown RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TUSC3Q13454 348 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM132DQ14C87 1099 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TLR1Q15399 786 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 SHHQ15465 462 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 DUOXA2Q1HG44 320 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TCTN1Q2MV58 587 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 UVSSAQ2YD98 709 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ELOA3BQ3SY89 546 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 CLLU1OSQ5K130 101 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF468Q5VIY5 522 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 CDKAL1Q5VV42 579 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 C11orf57Q6ZUT1 292 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TRIM59Q8IWR1 403 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ELOA3Q8NG57 546 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF689Q96CS4 500 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 FAXDC2Q96IV6 333 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ANKRD36BP1Q96IX9 119 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 CASD1Q96PB1 797 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 GAD1Q99259 594 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 CGRRF1Q99675 332 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM175Q9BSA9 504 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 APOL6Q9BWW8 343 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 PRO3102Q9H379 93 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 RC3H2Q9HBD1 1191 aaKnown RBP7.58□□□□□ -1.2
EPHA4-206ENST00000424339 ITGA11Q9UKX5 1188 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 USP20Q9Y2K6 914 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 HES2Q9Y543 173 aa7.58□□□□□ -1.2
EPHA4-206ENST00000424339 TRIP11Q15643 1979 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM265A0A087WTH1 108 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 A0A1W2PNR3 127 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 GTPBP10A4D1E9 387 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 GOLGA8IPA6NC78 632 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 LRRC10BA6NIK2 292 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 GOLGA8JA6NMD2 632 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TBKBP1A7MCY6 615 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 LACTBL1A8MY62 500 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM189-UBE2V1I3L0A0 370 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF500O60304 480 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TPM3P06753 285 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 H2AFB1P0C5Y9 115 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 H2AFB2P0C5Z0 115 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM191BP0C7N4 346 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 FGFR1P11362 822 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CDK11BP21127 795 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 LRPAP1P30533 357 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 ALDH7A1P49419 539 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 CASP4P49662 377 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 SMAD3P84022 425 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 DSC1Q08554 894 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 ELAVL2Q12926 359 aaKnown RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 BTG3Q14201 252 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-206ENST00000424339 ZBTB6Q15916 424 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 MAN2A1Q16706 1144 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 LRIT3Q3SXY7 679 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM259Q4ZIN3 620 aa7.57□□□□□ -1.2
EPHA4-206ENST00000424339 TCP11X2Q5H9J9 407 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms