RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 EPHA5P54756 1037 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 TMPRSS3P57727 454 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 PSMC5P62195 406 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 NR1H3Q13133 447 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 MXD4Q14582 209 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-203ENST00000424270 VEPH1Q14D04 833 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 EMC2Q15006 297 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 PDGFRLQ15198 375 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 CRY1Q16526 586 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 NAIF1Q69YI7 327 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-203ENST00000424270 DHRS13Q6UX07 377 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 SLC36A4Q6YBV0 504 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 RNF19BQ6ZMZ0 732 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 ZNF574Q6ZN55 896 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-203ENST00000424270 TMTC3Q6ZXV5 915 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 ANO5Q75V66 913 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 GLRX5Q86SX6 157 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 ITIH5Q86UX2 942 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 RASSF3Q86WH2 238 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 MICU3Q86XE3 530 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 REXO1Q8N1G1 1221 aaKnown RBP6.95□□□□□ -1.3
SDCBP-203ENST00000424270 DAGLBQ8NCG7 672 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 RDM1Q8NG50 284 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 TSC1Q92574 1164 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 GJA10Q969M2 543 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 HSPA12BQ96MM6 686 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 UROC1Q96N76 676 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 RIT2Q99578 217 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 PI4K2AQ9BTU6 479 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 SEMA4CQ9C0C4 833 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 FAM124BQ9H5Z6 455 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-203ENST00000424270 TASP1Q9H6P5 420 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 C6orf50Q9HD87 102 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 HPS4Q9NQG7 708 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 SEPT3Q9UH03 358 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 MMP17Q9ULZ9 603 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 CACNA1EQ15878 2313 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 OTOL1A6NHN0 477 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MEI4A8MW99 385 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 E7EWF7 191 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 hCG_1984214I3L0E3 225 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 PTGESO14684 152 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MSH4O15457 936 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 PRC1O43663 620 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 TLX3O43711 291 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 KLF8O95600 359 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 CER1O95813 267 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MYF5P13349 255 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 CDC25CP30307 473 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MCM4P33991 863 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 PTENP60484 403 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 PTH1RQ03431 593 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MBTD1Q05BQ5 628 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 KCNH2Q12809 1159 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 NFATC3Q12968 1075 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 GRIK2Q13002 908 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 SUZ12Q15022 739 aaKnown RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 INF2Q27J81 1249 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 XKR9Q5GH70 373 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 TYW1BQ6NUM6 668 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 PCSK4Q6UW60 755 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 OTUD6AQ7L8S5 288 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 NOSTRINQ8IVI9 506 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 TEX2Q8IWB9 1127 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 TMTC2Q8N394 836 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 ALLCQ8N6M5 410 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 ZNF713Q8N859 430 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 TRIML1Q8N9V2 468 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 TXNDC5Q8NBS9 432 aaKnown RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 APPL2Q8NEU8 664 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 USP33Q8TEY7 942 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 ATP2A3Q93084 1043 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MED8Q96G25 268 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 ZDHHC5Q9C0B5 715 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MIR1-1HGQ9H1L0 117 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 GAREM1Q9H706 876 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 GOLGA2P5Q9HBQ8 144 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 TM7SF3Q9NS93 570 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 WDR70Q9NW82 654 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 DUS2Q9NX74 493 aaKnown RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 NAP1L2Q9ULW6 460 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 MAFFQ9ULX9 164 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 SLC27A5Q9Y2P5 690 aa6.94□□□□□ -1.3
SDCBP-203ENST00000424270 V9GY48 417 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-203ENST00000424270 SPTA1P02549 2419 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 LRRIQ4A6NIV6 560 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 TMEM189-UBE2V1I3L0A0 370 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 SYN3O14994 580 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 N4BP3O15049 544 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 FLRT2O43155 660 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 ACTN2P35609 894 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 MATKP42679 507 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 QARSP47897 775 aaKnown RBP6.93□□□□□ -1.3
SDCBP-203ENST00000424270 YARSP54577 528 aaKnown RBP6.93□□□□□ -1.3
SDCBP-203ENST00000424270 UCNP55089 124 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 TLE3Q04726 772 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 DUSP4Q13115 394 aa6.93□□□□□ -1.3
SDCBP-203ENST00000424270 CAMK2BQ13554 666 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms