RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 ADGRF2Q8IZF7 708 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 AOPEPQ8N6M6 819 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 LRRC52Q8N7C0 313 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 CMASQ8NFW8 434 aaPredicted RBP10.39□□□□□ -0.75
HERC3-204ENST00000422770 SPATA20Q8TB22 786 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 ACSF2Q96CM8 615 aaPredicted RBP10.39□□□□□ -0.75
HERC3-204ENST00000422770 MFSD14AQ96MC6 490 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 TMEM209Q96SK2 561 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 GTPBP4Q9BZE4 634 aaKnown RBP10.39□□□□□ -0.75
HERC3-204ENST00000422770 NXF1Q9UBU9 619 aaKnown RBP10.39□□□□□ -0.75
HERC3-204ENST00000422770 SIX4Q9UIU6 781 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 L1RE1Q9UN81 338 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 TRAF3IP3Q9Y228 551 aa10.39□□□□□ -0.75
HERC3-204ENST00000422770 NCOR1O75376 2440 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 C2CD4DB7Z1M9 353 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 CETN3O15182 167 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 OAZ2O95190 189 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 SEC24AO95486 1093 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 HNRNPA1P09651 372 aaKnown RBP eCLIP10.38□□□□□ -0.75
HERC3-204ENST00000422770 TRIM49P0CI25 452 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 TRIM49CP0CI26 452 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 ATF2P15336 505 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 BMP6P22004 513 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 ACAT1P24752 427 aaKnown RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 PSMC2P35998 433 aaKnown RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 VAMP7P51809 220 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 MYL6P60660 151 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 DLG4P78352 724 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 NTHL1P78549 312 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 MYL7Q01449 175 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 TWF1Q12792 350 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 MRPL58Q14197 206 aaKnown RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 TAF12Q16514 161 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 ZNF699Q32M78 642 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 WDR72Q3MJ13 1102 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 MGAT5BQ3V5L5 792 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 DCAF17Q5H9S7 520 aaPredicted RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 TPGS2Q68CL5 300 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 RNF135Q8IUD6 432 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 SLC9A9Q8IVB4 645 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 OR10T2Q8NGX3 314 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 PARD3BQ8TEW8 1205 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 ELMO3Q96BJ8 720 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 ZNF707Q96C28 371 aaPredicted RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 SEPT5Q99719 369 aaPredicted RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 CORO1BQ9BR76 489 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 DMAC2Q9NW81 257 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 HCFC1R1Q9NWW0 138 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 DDX43Q9NXZ2 648 aaKnown RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 ABI2Q9NYB9 513 aaPredicted RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 AFF4Q9UHB7 1163 aaKnown RBP10.38□□□□□ -0.75
HERC3-204ENST00000422770 MUTYHQ9UIF7 546 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 INSL5Q9Y5Q6 135 aa10.38□□□□□ -0.75
HERC3-204ENST00000422770 ZNF638Q14966 1978 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 TBC1D4O60343 1298 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 SOAT2O75908 522 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 AKAP3O75969 853 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 ABLIM3O94929 683 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 C1RP00736 705 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 CYP11A1P05108 521 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 CD44P16070 742 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 FSHRP23945 695 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 ALDH1A3P47895 512 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 GCLMP48507 274 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 AP3M2P53677 418 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 STX17P56962 302 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 DUSP4Q13115 394 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 PAK1Q13153 545 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 NCOA4Q13772 614 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 MYBPC2Q14324 1141 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 EDRF1Q3B7T1 1238 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 CCDC40Q4G0X9 1142 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 PABPC1LQ4VXU2 614 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 ZNF667Q5HYK9 610 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 TDRD10Q5VZ19 366 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 ANKRD40Q6AI12 368 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 IQCEQ6IPM2 695 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 INTS8Q75QN2 995 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 OTOP3Q7RTS5 596 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 CREBRFQ8IUR6 639 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 TCEAL8Q8IYN2 117 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 DCP1BQ8IZD4 617 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 ADSSL1Q8N142 457 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 TMEM86AQ8N2M4 240 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 MLKLQ8NB16 471 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 ATAD1Q8NBU5 361 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 NELFBQ8WX92 580 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 ING5Q8WYH8 240 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 IMPG2Q9BZV3 1241 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 NAT10Q9H0A0 1025 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 CBX8Q9HC52 389 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 WDR6Q9NNW5 1121 aaKnown RBP10.37□□□□□ -0.75
HERC3-204ENST00000422770 SLC27A5Q9Y2P5 690 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms