RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 GPBP1Q86WP2 473 aa8.79□□□□□ -1
VIM-202ENST00000421459 SPEM1Q8N4L4 309 aa8.79□□□□□ -1
VIM-202ENST00000421459 FAM160A2Q8N612 972 aaPredicted RBP8.79□□□□□ -1
VIM-202ENST00000421459 MYCT1Q8N699 235 aa8.79□□□□□ -1
VIM-202ENST00000421459 LEMD2Q8NC56 503 aa8.79□□□□□ -1
VIM-202ENST00000421459 ZSWIM2Q8NEG5 633 aa8.79□□□□□ -1
VIM-202ENST00000421459 RIN3Q8TB24 985 aa8.79□□□□□ -1
VIM-202ENST00000421459 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
VIM-202ENST00000421459 PSMG2Q969U7 264 aa8.79□□□□□ -1
VIM-202ENST00000421459 CHFRQ96EP1 664 aa8.79□□□□□ -1
VIM-202ENST00000421459 RTKNQ9BST9 563 aa8.79□□□□□ -1
VIM-202ENST00000421459 MSTO1Q9BUK6 570 aa8.79□□□□□ -1
VIM-202ENST00000421459 TIPINQ9BVW5 301 aa8.79□□□□□ -1
VIM-202ENST00000421459 SLC46A2Q9BY10 475 aa8.79□□□□□ -1
VIM-202ENST00000421459 GPR88Q9GZN0 384 aa8.79□□□□□ -1
VIM-202ENST00000421459 SMOC1Q9H4F8 434 aa8.79□□□□□ -1
VIM-202ENST00000421459 ZHX3Q9H4I2 956 aa8.79□□□□□ -1
VIM-202ENST00000421459 RPF1Q9H9Y2 349 aaKnown RBP8.79□□□□□ -1
VIM-202ENST00000421459 IL21Q9HBE4 155 aa8.79□□□□□ -1
VIM-202ENST00000421459 FBRSL1Q9HCM7 1045 aaKnown RBP8.79□□□□□ -1
VIM-202ENST00000421459 MAFFQ9ULX9 164 aa8.79□□□□□ -1
VIM-202ENST00000421459 CCL26Q9Y258 94 aa8.79□□□□□ -1
VIM-202ENST00000421459 TRIP11Q15643 1979 aa8.79□□□□□ -1
VIM-202ENST00000421459 TICRRQ7Z2Z1 1910 aa8.78□□□□□ -1
VIM-202ENST00000421459 A0A0B4J269 797 aa8.78□□□□□ -1
VIM-202ENST00000421459 K7ENM7 598 aa8.78□□□□□ -1
VIM-202ENST00000421459 LAD1O00515 517 aa8.78□□□□□ -1
VIM-202ENST00000421459 PIRO00625 290 aa8.78□□□□□ -1
VIM-202ENST00000421459 CYB561D2O14569 222 aa8.78□□□□□ -1
VIM-202ENST00000421459 SLC30A4O14863 429 aa8.78□□□□□ -1
VIM-202ENST00000421459 HNRNPDLO14979 420 aaKnown RBP8.78□□□□□ -1
VIM-202ENST00000421459 CD2BP2O95400 341 aaKnown RBP8.78□□□□□ -1
VIM-202ENST00000421459 NEFLP07196 543 aa8.78□□□□□ -1
VIM-202ENST00000421459 ADRB2P07550 413 aa8.78□□□□□ -1
VIM-202ENST00000421459 ODC1P11926 461 aa8.78□□□□□ -1
VIM-202ENST00000421459 TYMPP19971 482 aa8.78□□□□□ -1
VIM-202ENST00000421459 SDHBP21912 280 aa8.78□□□□□ -1
VIM-202ENST00000421459 WNT7BP56706 349 aa8.78□□□□□ -1
VIM-202ENST00000421459 CCINQ13939 588 aa8.78□□□□□ -1
VIM-202ENST00000421459 MYBPC2Q14324 1141 aa8.78□□□□□ -1
VIM-202ENST00000421459 LRRC32Q14392 662 aa8.78□□□□□ -1
VIM-202ENST00000421459 PPP2R5DQ14738 602 aa8.78□□□□□ -1
VIM-202ENST00000421459 CCDC142Q17RM4 750 aa8.78□□□□□ -1
VIM-202ENST00000421459 MGAT5BQ3V5L5 792 aa8.78□□□□□ -1
VIM-202ENST00000421459 WSCD1Q658N2 575 aa8.78□□□□□ -1
VIM-202ENST00000421459 ARMCX5Q6P1M9 558 aa8.78□□□□□ -1
VIM-202ENST00000421459 PRR23CQ6ZRP0 262 aa8.78□□□□□ -1
VIM-202ENST00000421459 CEP68Q76N32 757 aa8.78□□□□□ -1
VIM-202ENST00000421459 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.78□□□□□ -1
VIM-202ENST00000421459 TMEM150AQ86TG1 271 aa8.78□□□□□ -1
VIM-202ENST00000421459 LONP2Q86WA8 852 aa8.78□□□□□ -1
VIM-202ENST00000421459 CDK5RAP3Q96JB5 506 aa8.78□□□□□ -1
VIM-202ENST00000421459 FIZ1Q96SL8 496 aa8.78□□□□□ -1
VIM-202ENST00000421459 ZCWPW1Q9H0M4 648 aa8.78□□□□□ -1
VIM-202ENST00000421459 ARRDC1-AS1Q9H2J1 176 aa8.78□□□□□ -1
VIM-202ENST00000421459 C8orf33Q9H7E9 229 aaPredicted RBP8.78□□□□□ -1
VIM-202ENST00000421459 SH2B1Q9NRF2 756 aaPredicted RBP8.78□□□□□ -1
VIM-202ENST00000421459 GKN1Q9NS71 199 aa8.78□□□□□ -1
VIM-202ENST00000421459 BLOC1S4Q9NUP1 217 aa8.78□□□□□ -1
VIM-202ENST00000421459 TMLHEQ9NVH6 421 aa8.78□□□□□ -1
VIM-202ENST00000421459 LARSQ9P2J5 1176 aaKnown RBP8.78□□□□□ -1
VIM-202ENST00000421459 CPSF3Q9UKF6 684 aaKnown RBP8.78□□□□□ -1
VIM-202ENST00000421459 ANO9A1A5B4 782 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 ANTXRLA6NF34 631 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 HCRTO43612 131 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 TRAK2O60296 914 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 FAM13AO94988 1023 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 PIGRP01833 764 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 ADRB1P08588 477 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 ARSAP15289 507 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 GJB2P29033 226 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 TMEM132DQ14C87 1099 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 KARSQ15046 597 aaKnown RBP8.77□□□□□ -1.01
VIM-202ENST00000421459 CSRP2Q16527 193 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 ARHGAP29Q52LW3 1261 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 TXNDC8Q6A555 127 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 FSTL4Q6MZW2 842 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 KBTBD6Q86V97 674 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 WDR5BQ86VZ2 330 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 RALGPS2Q86X27 583 aaPredicted RBP8.77□□□□□ -1.01
VIM-202ENST00000421459 MAB21L3Q8N8X9 362 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 TTC16Q8NEE8 873 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 NETO1Q8TDF5 533 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 BPIFB1Q8TDL5 484 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 E2F7Q96AV8 911 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 PYM1Q9BRP8 204 aaKnown RBP8.77□□□□□ -1.01
VIM-202ENST00000421459 EBF3Q9H4W6 596 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 TASP1Q9H6P5 420 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 HPS4Q9NQG7 708 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 ABI2Q9NYB9 513 aaPredicted RBP8.77□□□□□ -1.01
VIM-202ENST00000421459 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
VIM-202ENST00000421459 RALYQ9UKM9 306 aaKnown RBP8.77□□□□□ -1.01
VIM-202ENST00000421459 ASB3Q9Y575 518 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 CEP250Q9BV73 2442 aa8.77□□□□□ -1.01
VIM-202ENST00000421459 CFAP47Q6ZTR5 3102 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 DCLK1O15075 740 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 PAPSS2O95340 614 aaPredicted RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 EGFP01133 1207 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 F11P03951 625 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 CYP11A1P05108 521 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms