RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 GMEB1Q9Y692 573 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 MAGEB3O15480 346 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 PIK3CAP42336 1068 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 TUFMP49411 452 aaKnown RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 STAT5BP51692 787 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 OR52E8Q6IFG1 317 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 IRGCQ6NXR0 463 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 EXOC3L1Q86VI1 746 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 RNF149Q8NC42 400 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 LNX1Q8TBB1 728 aaPredicted RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 NEK9Q8TD19 979 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 PDGFCQ9NRA1 345 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 NXF1Q9UBU9 619 aaKnown RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 SLC12A6Q9UHW9 1150 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 FBXO9Q9UK97 447 aaPredicted RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 PTPN22Q9Y2R2 807 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 ITGA4P13612 1032 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 COG7P83436 770 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 PLOD1Q02809 727 aaPredicted RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 NAB2Q15742 525 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 SEMA4DQ92854 862 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 IQCDQ96DY2 449 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 SLC10A4Q96EP9 437 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 RAB3IPQ96QF0 476 aaPredicted RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 OSBPL10Q9BXB5 764 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 NDEL1Q9GZM8 345 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 RNPEPL1Q9HAU8 725 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 TXNRD2Q9NNW7 524 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 METTL5Q9NRN9 209 aaKnown RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 LRRC42Q9Y546 428 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 IGSF9BQ9UPX0 1349 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 MAGEA13PA6NCF6 341 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 SLC16A3O15427 465 aaKnown RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 FGGP02679 453 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 ADSSP30520 456 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 HSDL1Q3SXM5 330 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 C4orf19Q8IY42 314 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 SDR16C5Q8N3Y7 309 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 CPA5Q8WXQ8 436 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 LZICQ8WZA0 190 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 ANKRD27Q96NW4 1050 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 NT5C1BQ96P26 610 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 INTS9Q9NV88 658 aaKnown RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 AMACRQ9UHK6 382 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 AMFRQ9UKV5 643 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 POLR2AP24928 1970 aaKnown RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 SRRM3A6NNA2 597 aaPredicted RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 OPHN1O60890 802 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 SPATA31D3P0C874 917 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 KCNA2P16389 499 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 UBA1P22314 1058 aaKnown RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 CLCN3P51790 818 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 NLRP11P59045 1033 aaKnown RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 SPATA31D4Q6ZUB0 917 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 VSIG1Q86XK7 387 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 SLC15A3Q8IY34 581 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 TAB3Q8N5C8 712 aaPredicted RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 PPFIBP2Q8ND30 876 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 TMEM161BQ8NDZ6 487 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 SPATA33Q96N06 139 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 STK33Q9BYT3 514 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 PNMA2Q9UL42 364 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 AFG3L2Q9Y4W6 797 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 RARAP10276 462 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 CHN1P15882 459 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 CCDC25Q86WR0 208 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 CYP4X1Q8N118 509 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.3■□□□□ 0.042e-8■■■□□ 19
CHRD-204ENST00000420973 LENG1Q96BZ8 264 aaPredicted RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 MPP4Q96JB8 637 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 SRPK1Q96SB4 655 aaKnown RBP15.3■□□□□ 0.04
CHRD-204ENST00000420973 CENPKQ9BS16 269 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 SYT17Q9BSW7 474 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 DRC3Q9H069 523 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 AIPL1Q9NZN9 384 aa15.3■□□□□ 0.04
CHRD-204ENST00000420973 C5orf60A6NFR6 353 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 GJB6O95452 261 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 NAT2P11245 290 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 ALADP13716 330 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 YY1P25490 414 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 HDAC4P56524 1084 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 WDR44Q5JSH3 913 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 SV2AQ7L0J3 742 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 ASAP3Q8TDY4 903 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 VPS33BQ9H267 617 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 XPNPEP1Q9NQW7 623 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 ADARB2Q9NS39 739 aaKnown RBP15.29■□□□□ 0.04
CHRD-204ENST00000420973 MRGBPQ9NV56 204 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
CHRD-204ENST00000420973 HNRNPH3P31942 346 aaKnown RBP15.29■□□□□ 0.04
CHRD-204ENST00000420973 TMEM270Q6UE05 265 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 LRRC8CQ8TDW0 803 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 USP33Q8TEY7 942 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 C1orf112Q9NSG2 853 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 ANO9A1A5B4 782 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 SPTLC1O15269 473 aa15.29■□□□□ 0.04
CHRD-204ENST00000420973 DGAT1O75907 488 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms