RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 FAM184AQ8NB25 1140 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 LEMD2Q8NC56 503 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 NETO1Q8TDF5 533 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 GIPC2Q8TF65 315 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 PSMG2Q969U7 264 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 BICD1Q96G01 975 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 BORCS6Q96GS4 357 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 SENP8Q96LD8 212 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 SEPT5Q99719 369 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-203ENST00000420503 REEP2Q9BRK0 252 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 UBQLN1Q9UMX0 589 aaKnown RBP13.99□□□□□ -0.17
LINC00339-203ENST00000420503 CCL26Q9Y258 94 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 DENND4CQ5VZ89 1909 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 OBSL1O75147 1896 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 VWA3AA6NCI4 1184 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 ANTXRLA6NF34 631 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 AXIN1O15169 862 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 NCKAP1LP55160 1127 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 PPP2R3AQ06190 1150 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 DHX8Q14562 1220 aaKnown RBP13.98□□□□□ -0.17
LINC00339-203ENST00000420503 CSRP2Q16527 193 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 TMEM119Q4V9L6 283 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 SLC39A12Q504Y0 691 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 HYIQ5T013 277 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 SDHAF4Q5VUM1 108 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 DTHD1Q6ZMT9 781 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 USP37Q86T82 979 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 TMEM150AQ86TG1 271 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 LONP2Q86WA8 852 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 SLC46A2Q9BY10 475 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 FBRSL1Q9HCM7 1045 aaKnown RBP13.98□□□□□ -0.17
LINC00339-203ENST00000420503 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 ZNF638Q14966 1978 aaKnown RBP13.98□□□□□ -0.17
LINC00339-203ENST00000420503 TCHHQ07283 1943 aa13.98□□□□□ -0.17
LINC00339-203ENST00000420503 OR6C75A6NL08 312 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 ANKRD63C9JTQ0 380 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 SDHBP21912 280 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 PRPHP41219 470 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 ALDH1A3P47895 512 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 WNT7BP56706 349 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 LILRA4P59901 499 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-203ENST00000420503 GRIN1Q05586 938 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 LRRC32Q14392 662 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 ST3GAL2Q16842 350 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 SPATA1Q5VX52 437 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 C9orf57Q5W0N0 161 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 TCEAL6Q6IPX3 200 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 FSTL4Q6MZW2 842 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 CEP68Q76N32 757 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 KBTBD6Q86V97 674 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 TCEAL3Q969E4 200 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 IER2Q9BTL4 223 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 ARRDC1-AS1Q9H2J1 176 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 C17orf75Q9HAS0 396 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 PLEKHA5Q9HAU0 1116 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 TMLHEQ9NVH6 421 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 MAFFQ9ULX9 164 aa13.97□□□□□ -0.17
LINC00339-203ENST00000420503 FRYQ5TBA9 3013 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 K7ENM7 598 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 HNRNPDLO14979 420 aaKnown RBP13.96□□□□□ -0.17
LINC00339-203ENST00000420503 PAPSS2O95340 614 aaPredicted RBP13.96□□□□□ -0.17
LINC00339-203ENST00000420503 ARSAP15289 507 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 TYMPP19971 482 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 CYP3A5P20815 502 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 ACOT2P49753 483 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 LIG4P49917 911 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 HMGN5P82970 282 aaKnown RBP13.96□□□□□ -0.17
LINC00339-203ENST00000420503 PPP2R5DQ14738 602 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
LINC00339-203ENST00000420503 ZSWIM2Q8NEG5 633 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 FAM200AQ8TCP9 573 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 BPIFB1Q8TDL5 484 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 FIZ1Q96SL8 496 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 RAB34Q9BZG1 259 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 GPR88Q9GZN0 384 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 ZCWPW1Q9H0M4 648 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 EBF3Q9H4W6 596 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 C8orf33Q9H7E9 229 aaPredicted RBP13.96□□□□□ -0.17
LINC00339-203ENST00000420503 RPF1Q9H9Y2 349 aaKnown RBP13.96□□□□□ -0.17
LINC00339-203ENST00000420503 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.17
LINC00339-203ENST00000420503 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
LINC00339-203ENST00000420503 CHD6Q8TD26 2715 aa13.96□□□□□ -0.18
LINC00339-203ENST00000420503 ABCA7Q8IZY2 2146 aa13.96□□□□□ -0.18
LINC00339-203ENST00000420503 MYO16Q9Y6X6 1858 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 A0A0B4J269 797 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 PIRO00625 290 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 DPYSL4O14531 572 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 OGTO15294 1046 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 HCRTO43612 131 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 EGFP01133 1207 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 ADRB2P07550 413 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 SMTNP53814 917 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 MLLT6P55198 1093 aaPredicted RBP13.95□□□□□ -0.18
LINC00339-203ENST00000420503 MYBPC2Q14324 1141 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 MCM6Q14566 821 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
LINC00339-203ENST00000420503 ZC2HC1CQ53FD0 456 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1008.4 ms