RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 TRIM6Q9C030 488 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 GDAP2Q9NXN4 497 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 TTC7AQ9ULT0 858 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 A0A1W2PQ45 241 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 A0A1W2PQY0 241 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 TULP1O00294 542 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 THAP12O43422 761 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 AKAP5P24588 427 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 HTRA3P83110 453 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 PLEKHA7Q6IQ23 1121 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 ELOVL4Q9GZR5 314 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 AGO3Q9H9G7 860 aaKnown RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 BARX2Q9UMQ3 279 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 ATP8B1O43520 1251 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 FAM163BP0C2L3 166 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 MMP8P22894 467 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 MYO1EQ12965 1108 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 LPIN1Q14693 890 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 GSTCDQ8NEC7 633 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 C18orf25Q96B23 403 aaPredicted RBP14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 OSBPL7Q9BZF2 842 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 FAM105AQ9NUU6 356 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 NXF1Q9UBU9 619 aaKnown RBP14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 DMGDHQ9UI17 866 aaKnown RBP14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 TMEM59LQ9UK28 342 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 PTGESO14684 152 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 INPPL1O15357 1258 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 CD58P19256 250 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 CDK7P50613 346 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 RPS6KA1Q15418 735 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 FAM47CQ5HY64 1035 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 DAAM2Q86T65 1068 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 ACTRT1Q8TDG2 376 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 CPA5Q8WXQ8 436 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 TMEM176AQ96HP8 235 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 TWNKQ96RR1 684 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 TRMT13Q9NUP7 481 aaKnown RBP14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 KIAA1257Q9ULG3 409 aa14.25□□□□□ -0.13
TMEM50B-201ENST00000420455 PPEF2O14830 753 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 THPOP40225 353 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 CDH8P55286 799 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 DCAF12L1Q5VU92 463 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 NAA35Q5VZE5 725 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 SCARA5Q6ZMJ2 495 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 FAM43BQ6ZT52 329 aaPredicted RBP14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 KRT222Q8N1A0 295 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 ZNF653Q96CK0 615 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 GLT1D1Q96MS3 346 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 NUP85Q9BW27 656 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 XPOTO43592 962 aaKnown RBP14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 PNPLA4P41247 253 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 NSFP46459 744 aaKnown RBP14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 CFAP221Q4G0U5 840 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 PEX26Q7Z412 305 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 ZNF564Q8TBZ8 553 aaPredicted RBP14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 HINFPQ9BQA5 517 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 CNOT8Q9UFF9 292 aaKnown RBP14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 HMGXB4Q9UGU5 601 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 CHORDC1Q9UHD1 332 aaPredicted RBP14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 AMFRQ9UKV5 643 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 GIT1Q9Y2X7 761 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 ALG6Q9Y672 507 aa14.24□□□□□ -0.13
TMEM50B-201ENST00000420455 A0A0U1RQG5 324 aaPredicted RBP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 MED7O43513 233 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 CTNNA2P26232 953 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 RAB27AP51159 221 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 TWF2Q6IBS0 349 aaKnown RBP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 GSPT2Q8IYD1 628 aaKnown RBP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 PADI3Q9ULW8 664 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 KCNK3O14649 394 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 CAPN15O75808 1086 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 VDRP11473 427 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 CNGA2Q16280 664 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 PTPN22Q9Y2R2 807 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 NME7Q9Y5B8 376 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 MIF4GDA9UHW6 222 aaKnown RBP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 ATMINO43313 823 aaPredicted RBP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 MGEA5O60502 916 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 RRM1P23921 792 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 GABRB2P47870 512 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 PEX5P50542 639 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 TNNC1P63316 161 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 UNC93AQ86WB7 457 aa14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.23□□□□□ -0.13
TMEM50B-201ENST00000420455 ARVCFO00192 962 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 DNM1LO00429 736 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 TUBBP07437 444 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 CTSHP09668 335 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 CKBP12277 381 aa14.22□□□□□ -0.13
TMEM50B-201ENST00000420455 SLC7A5Q01650 507 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms