RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 SMOC2Q9H3U7 446 aa23.01■■□□□ 1.27
CPNE1-211ENST00000420363 R3HCC1Q9Y3T6 440 aaKnown RBP23.01■■□□□ 1.27
CPNE1-211ENST00000420363 TNNI1P19237 187 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 AP3M2P53677 418 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 ARPP19P56211 112 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 CLDN10P78369 228 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 MYO1EQ12965 1108 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 GPR17Q13304 367 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 MFSD1Q9H3U5 465 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 DOCK8Q8NF50 2099 aa23■■□□□ 1.27
CPNE1-211ENST00000420363 KMT2EQ8IZD2 1858 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 H0Y858 1186 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 PRRG1O14668 218 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 KRT19P08727 400 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 UBE2HP62256 183 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 ZCWPW2Q504Y3 356 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 ZNF658Q5TYW1 1059 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-211ENST00000420363 TRAPPC11Q7Z392 1133 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 TMEM86AQ8N2M4 240 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 TOP6BLQ8N6T0 577 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 SMARCE1Q969G3 411 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 CCDC127Q96BQ5 260 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 FAM84AQ96KN4 292 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 CYP4F11Q9HBI6 524 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 HSFX1Q9UBD0 423 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 PCDHA5Q9Y5H7 936 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 INSL5Q9Y5Q6 135 aa22.99■■□□□ 1.27
CPNE1-211ENST00000420363 CCL16O15467 120 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 GALR2O43603 387 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-211ENST00000420363 HUS1O60921 280 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 GADD45BO75293 160 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-211ENST00000420363 LRG1P02750 347 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 ENPEPQ07075 957 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 ADCY1Q08828 1119 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 BFSP1Q12934 665 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 EDRF1Q3B7T1 1238 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 WSCD1Q658N2 575 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 OR10T2Q8NGX3 314 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 PARD3BQ8TEW8 1205 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 AVENQ9NQS1 362 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-211ENST00000420363 L1RE1Q9UN81 338 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 FRMD4BQ9Y2L6 1034 aa22.98■■□□□ 1.27
CPNE1-211ENST00000420363 TULP1O00294 542 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-211ENST00000420363 STAU1O95793 577 aaKnown RBP22.97■■□□□ 1.27
CPNE1-211ENST00000420363 NR2F2P24468 414 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 SMARCB1Q12824 385 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 ASTLQ6HA08 431 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-211ENST00000420363 RNF19BQ6ZMZ0 732 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 DPH6Q7L8W6 267 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 LIMS2Q7Z4I7 341 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 THEM5Q8N1Q8 247 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 PDCL2Q8N4E4 241 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 TMC2Q8TDI7 906 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 HPDLQ96IR7 371 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 RTP3Q9BQQ7 232 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 ZCWPW1Q9H0M4 648 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.97■■□□□ 1.27
CPNE1-211ENST00000420363 EPS15L1Q9UBC2 864 aa22.97■■□□□ 1.27
CPNE1-211ENST00000420363 ZFP37Q9Y6Q3 630 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-211ENST00000420363 MTMR11A4FU01 709 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 GFRA3O60609 400 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 SEC24AO95486 1093 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 VNN2O95498 520 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 OR4Q2P0C623 313 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 RPL13P26373 211 aaKnown RBP22.96■■□□□ 1.27
CPNE1-211ENST00000420363 PLD1Q13393 1074 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 GRASPQ7Z6J2 395 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-211ENST00000420363 TMEM105Q8N8V8 129 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 PLEKHO2Q8TD55 490 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 C2orf15Q8WU43 125 aaKnown RBP22.96■■□□□ 1.27
CPNE1-211ENST00000420363 MAPK8IP1Q9UQF2 711 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 SNX9Q9Y5X1 595 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 DOCK6Q96HP0 2047 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 NOTCH4Q99466 2003 aa22.96■■□□□ 1.27
CPNE1-211ENST00000420363 LRRIQ3A6PVS8 624 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-211ENST00000420363 N4BP1O75113 896 aaKnown RBP22.95■■□□□ 1.26
CPNE1-211ENST00000420363 FSHRP23945 695 aa22.95■■□□□ 1.26
CPNE1-211ENST00000420363 CASP4P49662 377 aa22.95■■□□□ 1.26
CPNE1-211ENST00000420363 TDGQ13569 410 aa22.95■■□□□ 1.26
CPNE1-211ENST00000420363 CLEC17AQ6ZS10 378 aa22.95■■□□□ 1.26
CPNE1-211ENST00000420363 SMYD4Q8IYR2 804 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-211ENST00000420363 POLIQ9UNA4 740 aa22.95■■□□□ 1.26
CPNE1-211ENST00000420363 YIPF1Q9Y548 306 aa22.95■■□□□ 1.26
CPNE1-211ENST00000420363 ATICP31939 592 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 PPP1R2P41236 205 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 PRCPP42785 496 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 LHX1P48742 406 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 CLCN5P51795 746 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 MYL7Q01449 175 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 PABPC1LQ4VXU2 614 aaKnown RBP22.94■■□□□ 1.26
CPNE1-211ENST00000420363 CEP135Q66GS9 1140 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 SCARA3Q6AZY7 606 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 CENPPQ6IPU0 288 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 INTS8Q75QN2 995 aaKnown RBP22.94■■□□□ 1.26
CPNE1-211ENST00000420363 GET4Q7L5D6 327 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-211ENST00000420363 DCP1BQ8IZD4 617 aaKnown RBP22.94■■□□□ 1.26
CPNE1-211ENST00000420363 ADGRF2Q8IZF7 708 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 ELMOD1Q8N336 334 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 LEMD2Q8NC56 503 aa22.94■■□□□ 1.26
CPNE1-211ENST00000420363 ZNF516Q92618 1163 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms