RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 SQORQ9Y6N5 450 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 PDCD11Q14690 1871 aaKnown RBP13.73□□□□□ -0.21
LINC00642-201ENST00000419459 SSU72P8A0A1W2PR75 194 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 LACTBL1A8MY62 500 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 KIAA0391O15091 583 aaKnown RBP13.73□□□□□ -0.21
LINC00642-201ENST00000419459 TIMP1P01033 207 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ACRP10323 421 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 GRM5P41594 1212 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ATP1A2P50993 1020 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 DSC3Q14574 896 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
LINC00642-201ENST00000419459 ARHGAP20Q9P2F6 1191 aa13.73□□□□□ -0.21
LINC00642-201ENST00000419459 CES2O00748 559 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 MOCS3O95396 460 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 AFPP02771 609 aaKnown RBP13.72□□□□□ -0.21
LINC00642-201ENST00000419459 CLTAP09496 248 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 HSPA9P38646 679 aaKnown RBP13.72□□□□□ -0.21
LINC00642-201ENST00000419459 MLH1P40692 756 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 FMO5P49326 533 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 GUCY2FP51841 1108 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
LINC00642-201ENST00000419459 PSMD6Q15008 389 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 CCDC121Q6ZUS5 278 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 TNS4Q8IZW8 715 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 TLR10Q9BXR5 811 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 RABEP2Q9H5N1 569 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 PLCB1Q9NQ66 1216 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 CHST12Q9NRB3 414 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
LINC00642-201ENST00000419459 TTC3P53804 2025 aa13.72□□□□□ -0.21
LINC00642-201ENST00000419459 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
LINC00642-201ENST00000419459 A0A0U1RQF3 1178 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 KIAA0355O15063 1070 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 MAPK13O15264 365 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 AKR1B10O60218 316 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 MAGEA1P43355 309 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 GUCY1A3Q02108 690 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 BIRC3Q13489 604 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 SNCBQ16143 134 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 RNF187Q5TA31 235 aaPredicted RBP13.71□□□□□ -0.21
LINC00642-201ENST00000419459 AGMOQ6ZNB7 445 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 TMCO2Q7Z6W1 182 aaPredicted RBP13.71□□□□□ -0.21
LINC00642-201ENST00000419459 PIK3R5Q8WYR1 880 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 TMEM117Q9H0C3 514 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 NUCKS1Q9H1E3 243 aaKnown RBP13.71□□□□□ -0.21
LINC00642-201ENST00000419459 CACNG4Q9UBN1 327 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 ZMYND8Q9ULU4 1186 aaPredicted RBP13.71□□□□□ -0.21
LINC00642-201ENST00000419459 LTBP2Q14767 1821 aa13.71□□□□□ -0.21
LINC00642-201ENST00000419459 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.22
LINC00642-201ENST00000419459 SLC8A1P32418 973 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 TDRD10Q5VZ19 366 aaKnown RBP13.71□□□□□ -0.22
LINC00642-201ENST00000419459 KCTD16Q68DU8 428 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 SV2AQ7L0J3 742 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 SNX27Q96L92 541 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 GAD1Q99259 594 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 TMBIM4Q9HC24 238 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 SLC40A1Q9NP59 571 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 FAM207AQ9NSI2 230 aaPredicted RBP13.71□□□□□ -0.22
LINC00642-201ENST00000419459 GCNT4Q9P109 453 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 NFU1Q9UMS0 254 aa13.71□□□□□ -0.22
LINC00642-201ENST00000419459 SCN1AP35498 2009 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 C9IYK1 514 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 EPHB6O15197 1021 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 EVI5O60447 810 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 CXCL10P02778 98 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 PAEPP09466 180 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 FGFR1P11362 822 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 ACTN1P12814 892 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 SLC9A1P19634 815 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
LINC00642-201ENST00000419459 CARSP49589 748 aaKnown RBP13.7□□□□□ -0.22
LINC00642-201ENST00000419459 MXI1P50539 228 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 YARSP54577 528 aaKnown RBP13.7□□□□□ -0.22
LINC00642-201ENST00000419459 TNNC1P63316 161 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 MYL7Q01449 175 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 KCNMA1Q12791 1236 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 CUL1Q13616 776 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 LACTB2Q53H82 288 aaPredicted RBP13.7□□□□□ -0.22
LINC00642-201ENST00000419459 KLHDC7AQ5VTJ3 777 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 TAS1R2Q8TE23 839 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 SEPT8Q92599 483 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 BADQ92934 168 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 C18orf25Q96B23 403 aaPredicted RBP13.7□□□□□ -0.22
LINC00642-201ENST00000419459 CYFIP2Q96F07 1278 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 SGSM3Q96HU1 749 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 PI4K2AQ9BTU6 479 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
LINC00642-201ENST00000419459 GOLGA2P5Q9HBQ8 144 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 EPB41L5Q9HCM4 733 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 RGS18Q9NS28 235 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 PRKAG2Q9UGJ0 569 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 SIK3Q9Y2K2 1263 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 XIRP2A4UGR9 3374 aa13.7□□□□□ -0.22
LINC00642-201ENST00000419459 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.69□□□□□ -0.22
LINC00642-201ENST00000419459 GMNCA6NCL1 334 aa13.69□□□□□ -0.22
LINC00642-201ENST00000419459 C5orf60A6NFR6 353 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms