RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 GLB1LQ6UWU2 654 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 SYT10Q6XYQ8 523 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 NOP9Q86U38 636 aaKnown RBP6.36□□□□□ -1.39
HMGB3-202ENST00000419110 SLC47A2Q86VL8 602 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 ABI1Q8IZP0 508 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 UBR7Q8N806 425 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 SMG8Q8ND04 991 aaKnown RBP6.36□□□□□ -1.39
HMGB3-202ENST00000419110 RSPH1Q8WYR4 309 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 ZNF653Q96CK0 615 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 CALR3Q96L12 384 aaKnown RBP6.36□□□□□ -1.39
HMGB3-202ENST00000419110 UROC1Q96N76 676 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 ADAM2Q99965 735 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 SYT11Q9BT88 431 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 HIPK3Q9H422 1215 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 AGO3Q9H9G7 860 aaKnown RBP6.36□□□□□ -1.39
HMGB3-202ENST00000419110 NPDC1Q9NQX5 325 aaPredicted RBP6.36□□□□□ -1.39
HMGB3-202ENST00000419110 CISHQ9NSE2 258 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 KLK14Q9P0G3 267 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 DNAI1Q9UI46 699 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 PAXBP1Q9Y5B6 917 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 GBF1Q92538 1859 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 CENPFP49454 3210 aa6.36□□□□□ -1.39
HMGB3-202ENST00000419110 A0A0U1RQF3 1178 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 SMIM28A0A1B0GU29 152 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ANKRD62A6NC57 917 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 TMCO5BA8MYB1 307 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 DDX3XO00571 662 aaKnown RBP eCLIP6.35□□□□□ -1.395e-15■■□□□ 14.2
HMGB3-202ENST00000419110 PTGESO14684 152 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 MEFVO15553 781 aaPredicted RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 MGEA5O60502 916 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 HUS1O60921 280 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ZNF623O75123 536 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 RNF40O75150 1001 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 RTN2O75298 545 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 CILPO75339 1184 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 SGPL1O95470 568 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 THP07101 528 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 MMEP08473 750 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ODC1P11926 461 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 GZMAP12544 262 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ACO1P21399 889 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ABCB4P21439 1286 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 PAX3P23760 479 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 BRD2P25440 801 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 LRPAP1P30533 357 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 RFC2P35250 354 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 GJA8P48165 433 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 CDK7P50613 346 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 LBX1P52954 281 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 FMO1Q01740 532 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 CENPCQ03188 943 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 TUSC3Q13454 348 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 CLEC16AQ2KHT3 1053 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 SGO2Q562F6 1265 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 XKR4Q5GH76 650 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 LIN9Q5TKA1 542 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 TRAF7Q6Q0C0 670 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ANKRD33Q7Z3H0 272 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ECHDC2Q86YB7 292 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 RHOT2Q8IXI1 618 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ADGRF2Q8IZF7 708 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 SYCE1Q8N0S2 351 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 SLC35F6Q8N357 371 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 RNF10Q8N5U6 811 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 IPO4Q8TEX9 1081 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 LPPQ93052 612 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 C18orf25Q96B23 403 aaPredicted RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ZFP42Q96MM3 310 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ZMAT2Q96NC0 199 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 PPP1R10Q96QC0 940 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 MMS19Q96T76 1030 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 GAD1Q99259 594 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 NT5C1AQ9BXI3 368 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 MRPL9Q9BYD2 267 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 C11orf49Q9H6J7 331 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 TRIM10Q9UDY6 481 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 GTF3C4Q9UKN8 822 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 LRFN2Q9ULH4 789 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 BARX2Q9UMQ3 279 aaPredicted RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 NENFQ9UMX5 172 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 CNTN6Q9UQ52 1028 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ATP11BQ9Y2G3 1177 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 INPP5FQ9Y2H2 1132 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 SNX9Q9Y5X1 595 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 CAPN6Q9Y6Q1 641 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 SCINQ9Y6U3 715 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 COL4A6Q14031 1691 aa6.35□□□□□ -1.39
HMGB3-202ENST00000419110 ZNF638Q14966 1978 aaKnown RBP6.35□□□□□ -1.39
HMGB3-202ENST00000419110 RCCD1A6NED2 376 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 ARL5CA6NH57 179 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 M0QYV0 167 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PODXLO00592 558 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 INPPL1O15357 1258 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 KIF4AO95239 1232 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 MOCS3O95396 460 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 CALB1P05937 261 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 CLTBP09497 229 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms