RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 SLC30A1Q9Y6M5 507 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 RHOCP08134 193 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 PHKG1Q16816 387 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 MFSD4BQ5TF39 518 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 OR6P1Q8NGX9 317 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 SDCCAG3Q96C92 435 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 CGRRF1Q99675 332 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 STX2P32856 288 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 MLH1P40692 756 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 WDCPQ9H6R7 721 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 PTCH2Q9Y6C5 1203 aa17.81■□□□□ 0.44
SYNGAP1-202ENST00000418600 MMP3P08254 477 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 GARTP22102 1010 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 MAPK9P45984 424 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 KRT31Q15323 416 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 ANKRD42Q8N9B4 389 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 MTMR12Q9C0I1 747 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 SLMAPQ14BN4 828 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 PPTC7Q8NI37 304 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 TTC8Q8TAM2 541 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 FAM71BQ8TC56 605 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 SYT15Q9BQS2 421 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 C11orf84Q9BUA3 381 aaPredicted RBP17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 NPTX2P47972 431 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 CRYBB1P53674 252 aaPredicted RBP17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 NAA25Q14CX7 972 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 SUSD6Q92537 303 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 CABS1Q96KC9 395 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 CCSER1Q9C0I3 900 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 RGS16O15492 202 aaPredicted RBP17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 FBXO21O94952 628 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 ACOT1Q86TX2 421 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 RASSF3Q86WH2 238 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 RAPGEF5Q92565 580 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 PPP1R2P1Q96PQ5 205 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 RUSC1Q9BVN2 902 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 SCNN1GP51170 649 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 SEMA3FQ13275 785 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 ANGPTL8Q6UXH0 198 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 TRIM67Q6ZTA4 783 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 DDX41Q9UJV9 622 aaKnown RBP17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 PCDHB2Q9Y5E7 798 aa17.8■□□□□ 0.44
SYNGAP1-202ENST00000418600 ASTN2O75129 1339 aaPredicted RBP17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 ZRANB2O95218 330 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■■■■ 27.8
SYNGAP1-202ENST00000418600 YWHAQP27348 245 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 BBS9Q3SYG4 887 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 DUSP28Q4G0W2 176 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 PID1Q7Z2X4 250 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 TRIM45Q9H8W5 580 aaPredicted RBP17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 SLC45A1Q9Y2W3 748 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 FAM205CA6NFA0 338 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 EFCAB8A8MWE9 144 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 MAPK13O15264 365 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 TTI1O43156 1089 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 GUCY2FP51841 1108 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 SH3BGRP55822 239 aaPredicted RBP17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 ERAP2Q6P179 960 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 GRAP2O75791 330 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 RHOBTB3O94955 611 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 SYT2Q8N9I0 419 aaPredicted RBP17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 PBKQ96KB5 322 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 RIOX1Q9H6W3 641 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 POLR2EP19388 210 aaKnown RBP17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 ACBD5Q5T8D3 534 aaPredicted RBP17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 HS6ST3Q8IZP7 471 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 MGARPQ8TDB4 240 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 DCLK3Q9C098 648 aa17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
SYNGAP1-202ENST00000418600 HIST1H2AGP0C0S8 130 aaPredicted RBP17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 HIST1H2ADP20671 130 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 HADHAP40939 763 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 MTA1Q13330 715 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 DBN1Q16643 649 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 IMPG1Q17R60 797 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 PHLDB3Q6NSJ2 640 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 CCDC170Q8IYT3 715 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 HIST1H2AHQ96KK5 128 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 HIST1H2AJQ99878 128 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 OMDQ99983 421 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 H2AFJQ9BTM1 129 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 C1QTNF7Q9BXJ2 289 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 SENP1Q9P0U3 644 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 MID2Q9UJV3 735 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 PRR29P0C7W0 189 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 DDX5P17844 614 aaKnown RBP17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 CASP7P55210 303 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 CCDC38Q502W7 563 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 DDX42Q86XP3 938 aaKnown RBP eCLIP17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 ZNF557Q8N988 423 aaPredicted RBP17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 RNF25Q96BH1 459 aaPredicted RBP17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 C7orf25Q9BPX7 421 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 ST3GAL5Q9UNP4 418 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 PKP3Q9Y446 797 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 FTCDO95954 541 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 CXCL8P10145 99 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 PLCL1Q15111 1095 aa17.78■□□□□ 0.44
SYNGAP1-202ENST00000418600 GRIK5Q16478 980 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms