RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 DLG1Q12959 904 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 TMED1Q13445 227 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 PDK3Q15120 406 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 DNAL1Q4LDG9 190 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 INTS5Q6P9B9 1019 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 KLHDC10Q6PID8 442 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 KYAT3Q6YP21 454 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 TCP10LQ8TDR4 215 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CLPTM1LQ96KA5 538 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 UIMC1Q96RL1 719 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 RBM38Q9H0Z9 239 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 IKZF4Q9H2S9 585 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 BTBD7Q9P203 1132 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 SSX2IPQ9Y2D8 614 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 LRRC37AA6NMS7 1700 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 USP17L5A8MUK1 530 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 EIF3DO15371 548 aaKnown RBP eCLIP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 ZNF189O75820 626 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 MYL2P10916 166 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 ARHGAP4P98171 946 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 KLF1Q13351 362 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 FASTKD3Q14CZ7 662 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 CCNG2Q16589 344 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 ANKRD20A4Q4UJ75 823 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 EPS8L1Q8TE68 723 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 THTPAQ9BU02 230 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 KLHL4Q9C0H6 718 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 S100A14Q9HCY8 104 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 UBE2TQ9NPD8 197 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 NOCTQ9UK39 431 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 NDC80O14777 642 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 TBCAO75347 108 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 IL1BP01584 269 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 TFAP2AP05549 437 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 GALK1P51570 392 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 AQP4P55087 323 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 PRKD1Q15139 912 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 MMEL1Q495T6 779 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 EFHC2Q5JST6 749 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 TREML1Q86YW5 311 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 NEDD1Q8NHV4 660 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 EYA3Q99504 573 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 BCAS3Q9H6U6 928 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 VPS37BQ9H9H4 285 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 DDX18Q9NVP1 670 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 BARX2Q9UMQ3 279 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 C2orf71A6NGG8 1288 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 MEIS1O00470 390 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 IDO1P14902 403 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 CHSY1Q86X52 802 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 RSPH1Q8WYR4 309 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 GFM2Q969S9 779 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 ZNF287Q9HBT7 754 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 TBCCD1Q9NVR7 557 aa8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 DDX60LQ5H9U9 1706 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-202ENST00000418170 C15orf38-AP3S2A0A0A6YYH1 394 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SUPT3HO75486 399 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ENO1P06733 434 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 RPA1P27694 616 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SPIRE1Q08AE8 756 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 LRRC36Q1X8D7 754 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 NSMFQ6X4W1 530 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 RNF111Q6ZNA4 994 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ARPINQ7Z6K5 226 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ZBED8Q8IZ13 594 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 BANPQ8N9N5 519 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SNRNP27Q8WVK2 155 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ALKBH8Q96BT7 664 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 MRRFQ96E11 262 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 RMI1Q9H9A7 625 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC17A7Q9P2U7 560 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 FETUBQ9UGM5 382 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 FRMD4BQ9Y2L6 1034 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SGPL1O95470 568 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 CLPTM1O96005 669 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SERPINB8P50452 374 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 LPCAT4Q643R3 524 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 NCCRP1Q6ZVX7 275 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ALYREFQ86V81 257 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ARHGEF19Q8IW93 802 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 NUP93Q8N1F7 819 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC25A41Q8N5S1 370 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ETNPPLQ8TBG4 499 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 BTBD9Q96Q07 612 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 DMAC2Q9NW81 257 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 DMTF1Q9Y222 760 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 NFASCO94856 1347 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 FRMPD2Q68DX3 1309 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SPECC1L-ADORA2AF8WAN1 911 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 DNALI1O14645 258 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 MAGEB3O15480 346 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 DHRS4L1P0CG22 281 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 GAP43P17677 238 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 BFSP1Q12934 665 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms