RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 LRRTM3Q86VH5 581 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 ARID3BQ8IVW6 561 aaPredicted RBP16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 EFCAB13Q8IY85 973 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 TTC8Q8TAM2 541 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 FAM3CQ92520 227 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 DNAJC19Q96DA6 116 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 BORCS6Q96GS4 357 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 SEPT5Q99719 369 aaPredicted RBP16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 PYM1Q9BRP8 204 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 STRA6Q9BX79 667 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 ATXN3LQ9H3M9 355 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 MRPL44Q9H9J2 332 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 CCDC39Q9UFE4 941 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 SRPRBQ9Y5M8 271 aaKnown RBP16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 PIAS3Q9Y6X2 628 aa16.87■□□□□ 0.29
RHBDF1-202ENST00000417043 ARNTLO00327 626 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 MAN2B1O00754 1011 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 CCNE1P24864 410 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 GABRR2P28476 465 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 MAGEA9P43362 315 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 CASP5P51878 434 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 FAM200AQ8TCP9 573 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 GIPC2Q8TF65 315 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 DEPDC1BQ8WUY9 529 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 ATRIPQ8WXE1 791 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 PSMG2Q969U7 264 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 RMDN1Q96DB5 314 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 ZFYVE19Q96K21 471 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 GPR88Q9GZN0 384 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 ZCWPW1Q9H0M4 648 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 LMAN1LQ9HAT1 526 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 STK17AQ9UEE5 414 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 C2CD2Q9Y426 696 aa16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 KIF26AQ9ULI4 1882 aaPredicted RBP16.86■□□□□ 0.29
RHBDF1-202ENST00000417043 CEP250Q9BV73 2442 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 A0A087X0B3 334 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 ATF6P18850 670 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 ABCD1P33897 745 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 SOX9P48436 509 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 TAF6P49848 677 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 CYP4F8P98187 520 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 MGAT5BQ3V5L5 792 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 GPR158Q5T848 1215 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 METTL23Q86XA0 190 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 YAF2Q8IY57 180 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 RUBCNQ92622 972 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 USP28Q96RU2 1077 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 FAM213AQ9BRX8 229 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 TRPV5Q9NQA5 729 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 ZSCAN32Q9NX65 697 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 ASB3Q9Y575 518 aa16.85■□□□□ 0.29
RHBDF1-202ENST00000417043 GOLGA8IPA6NC78 632 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 GOLGA8JA6NMD2 632 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 SLC38A8A6NNN8 435 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 GCNT3O95395 438 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 IDEP14735 1019 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 PDCP20941 246 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 ZBTB44Q8NCP5 570 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 STKLD1Q8NE28 680 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 CSGALNACT1Q8TDX6 532 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 NELL1Q92832 810 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 SMG9Q9H0W8 520 aaKnown RBP16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 CHRDQ9H2X0 955 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 IL21Q9HBE4 155 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 PRMT8Q9NR22 394 aaPredicted RBP16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 TMLHEQ9NVH6 421 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 DNAH14Q0VDD8 3507 aa16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 ZNF638Q14966 1978 aaKnown RBP16.84■□□□□ 0.29
RHBDF1-202ENST00000417043 KPNA7A9QM74 516 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 CHADO15335 359 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 CHRNB1P11230 501 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 GAP43P17677 238 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 PAX3P23760 479 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 TFAMQ00059 246 aaKnown RBP16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 GAS6Q14393 721 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 POSTNQ15063 836 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 WDR44Q5JSH3 913 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 L1TD1Q5T7N2 865 aaKnown RBP16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 DENND4CQ5VZ89 1909 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 ITIH5Q86UX2 942 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 THEM5Q8N1Q8 247 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 NUP210Q8TEM1 1887 aaPredicted RBP16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 E2F7Q96AV8 911 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 ATG2BQ96BY7 2078 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 HVCN1Q96D96 273 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 ACCSQ96QU6 501 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 PCIF1Q9H4Z3 704 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 ABI2Q9NYB9 513 aaPredicted RBP16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 GTSE1Q9NYZ3 720 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 DSEQ9UL01 958 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 MTMR6Q9Y217 621 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 PCDHGA2Q9Y5H1 932 aa16.83■□□□□ 0.28
RHBDF1-202ENST00000417043 DPYSL4O14531 572 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms