RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 CPLX3Q8WVH0 158 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 AUTS2Q8WXX7 1259 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 CLP1Q92989 425 aaKnown RBP8.64□□□□□ -1.03
MDC1-203ENST00000417033 SUSD3Q96L08 255 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 TMEM209Q96SK2 561 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 MMS19Q96T76 1030 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 RTP3Q9BQQ7 232 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 COLEC11Q9BWP8 271 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 IMPG2Q9BZV3 1241 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 DPEP3Q9H4B8 488 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 ACP6Q9NPH0 428 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 PLCB1Q9NQ66 1216 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 GDAP2Q9NXN4 497 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 ADAM28Q9UKQ2 775 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 PCDHA11Q9Y5I1 949 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 VWA8A3KMH1 1905 aa8.64□□□□□ -1.03
MDC1-203ENST00000417033 ITIH6Q6UXX5 1313 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 FAM170AA1A519 330 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 M0QZQ0 153 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 RFXAPO00287 272 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 SOX1O00570 391 aaPredicted RBP8.63□□□□□ -1.03
MDC1-203ENST00000417033 TADA2AO75478 443 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 ZMYND10O75800 440 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 FGF18O76093 207 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 TRIM21P19474 475 aaKnown RBP8.63□□□□□ -1.03
MDC1-203ENST00000417033 ACAT1P24752 427 aaKnown RBP8.63□□□□□ -1.03
MDC1-203ENST00000417033 DNAJB1P25685 340 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 DNAJB2P25686 324 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 LMO2P25791 158 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 CDC25BP30305 580 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 CASP14P31944 242 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 BMPR1AP36894 532 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 PNPLA4P41247 253 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 ALDH7A1P49419 539 aaKnown RBP8.63□□□□□ -1.03
MDC1-203ENST00000417033 JAM2P57087 298 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 MYO1EQ12965 1108 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 ZNF394Q53GI3 561 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 FAM171A1Q5VUB5 890 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 SPECC1LQ69YQ0 1117 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 PDXDC1Q6P996 788 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 PRSS55Q6UWB4 352 aaPredicted RBP8.63□□□□□ -1.03
MDC1-203ENST00000417033 CEP57Q86XR8 500 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 OR10T2Q8NGX3 314 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 TAF4BQ92750 862 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 ELOVL4Q9GZR5 314 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 ALG13Q9NP73 1137 aaKnown RBP8.63□□□□□ -1.03
MDC1-203ENST00000417033 CISHQ9NSE2 258 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 SPG21Q9NZD8 308 aa8.63□□□□□ -1.03
MDC1-203ENST00000417033 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
MDC1-203ENST00000417033 SF3B1O75533 1304 aaKnown RBP eCLIP8.62□□□□□ -1.03
MDC1-203ENST00000417033 LRRC53A6NM62 1247 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 F8VZ95 297 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 FOXN3O00409 490 aaPredicted RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 C2CD2LO14523 706 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 GRM6O15303 877 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 ADAM12O43184 909 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 ATP2C2O75185 946 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 CILPO75339 1184 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 GFPT2O94808 682 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 TPM3P06753 285 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 PDGFRBP09619 1106 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 OR4Q2P0C623 313 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 ODC1P11926 461 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 RPL17P18621 184 aaKnown RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 FGFR3P22607 806 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 WARSP23381 471 aaKnown RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 SSTR3P32745 418 aaPredicted RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 IRS1P35568 1242 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 NDST1P52848 882 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 EMP3P54852 163 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 ADKP55263 362 aaKnown RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 PSMC1P62191 440 aaKnown RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 GCNT1Q02742 428 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 VARS2Q5ST30 1063 aaKnown RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 PPP2R2DQ66LE6 453 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 RSPO2Q6UXX9 243 aaPredicted RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 TOP6BLQ8N6T0 577 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 RBBP8NLQ8NC74 664 aaPredicted RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 CCDC150Q8NCX0 1101 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 APPL2Q8NEU8 664 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 OR6B3Q8NGW1 331 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 OLIG1Q8TAK6 271 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 GDPD5Q8WTR4 605 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 SHC3Q92529 594 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 TMEM169Q96HH4 297 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 TGS1Q96RS0 853 aaKnown RBP8.62□□□□□ -1.03
MDC1-203ENST00000417033 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 HERC2P3Q9BVR0 1158 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 CEP72Q9P209 647 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 MSRAQ9UJ68 235 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 PCDHB4Q9Y5E5 795 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 TRIOBPQ9H2D6 2365 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 NLRC5Q86WI3 1866 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 PLXNA4Q9HCM2 1894 aa8.62□□□□□ -1.03
MDC1-203ENST00000417033 GABRDO14764 452 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 GPR37O15354 613 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 CYP26A1O43174 497 aa8.61□□□□□ -1.03
MDC1-203ENST00000417033 HUS1O60921 280 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms