RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 C3orf58Q8NDZ4 430 aa15.54■□□□□ 0.08
SGCE-202ENST00000415788 FAXDC2Q96IV6 333 aa15.54■□□□□ 0.08
SGCE-202ENST00000415788 XYLT2Q9H1B5 865 aa15.54■□□□□ 0.08
SGCE-202ENST00000415788 VPS16Q9H269 839 aa15.54■□□□□ 0.08
SGCE-202ENST00000415788 EPC1Q9H2F5 836 aa15.54■□□□□ 0.08
SGCE-202ENST00000415788 A0A1B0GTH6 734 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 KPNA7A9QM74 516 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 NT5C1B-RDH14C9J2C7 533 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 ASS1P00966 412 aaKnown RBP15.53■□□□□ 0.08
SGCE-202ENST00000415788 P4HA1P13674 534 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 LMAN1P49257 510 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 MYL6P60660 151 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 WDR44Q5JSH3 913 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 BEND6Q5SZJ8 279 aaPredicted RBP15.53■□□□□ 0.08
SGCE-202ENST00000415788 GBP6Q6ZN66 633 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 C17orf80Q9BSJ5 609 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 ACBD3Q9H3P7 528 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 LZTS1Q9Y250 596 aa15.53■□□□□ 0.08
SGCE-202ENST00000415788 MYO1CO00159 1063 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 PPEF2O14830 753 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 FGF18O76093 207 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 ARHGEF15O94989 841 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 ADKP55263 362 aaKnown RBP15.52■□□□□ 0.08
SGCE-202ENST00000415788 UBE3AQ05086 875 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 EXOC3L4Q17RC7 722 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 FUT10Q6P4F1 479 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 CD300LGQ6UXG3 332 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 SRLQ86TD4 932 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 TMEM173Q86WV6 379 aaPredicted RBP15.52■□□□□ 0.08
SGCE-202ENST00000415788 TMEM130Q8N3G9 435 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 SUSD3Q96L08 255 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 GDAP2Q9NXN4 497 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 GCNT4Q9P109 453 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 PUF60Q9UHX1 559 aaKnown RBP15.52■□□□□ 0.08
SGCE-202ENST00000415788 TRIP11Q15643 1979 aa15.52■□□□□ 0.08
SGCE-202ENST00000415788 H3BQF6 201 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 ITGB1P05556 798 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 NOP14P78316 857 aaKnown RBP15.52■□□□□ 0.07
SGCE-202ENST00000415788 ZNF667Q5HYK9 610 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 DSTYKQ6XUX3 929 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 DDX53Q86TM3 631 aaKnown RBP15.52■□□□□ 0.07
SGCE-202ENST00000415788 PPFIBP1Q86W92 1011 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 GOLGA6L1Q8N7Z2 621 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 KLHL23Q8NBE8 558 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 FBXO22Q8NEZ5 403 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 HASPINQ8TF76 798 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 SEMA4DQ92854 862 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 ADGRG1Q9Y653 693 aa15.52■□□□□ 0.07
SGCE-202ENST00000415788 TNRC18O15417 2968 aaPredicted RBP15.52■□□□□ 0.07
SGCE-202ENST00000415788 F8W810 466 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 M0QZQ0 153 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 SYN3O14994 580 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 SPTLC1O15269 473 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 CLSTN1O94985 981 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 TNNC1P63316 161 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 UBXN1Q04323 297 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 WDR72Q3MJ13 1102 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 TIGD5Q53EQ6 642 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 DPH6Q7L8W6 267 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 RNF168Q8IYW5 571 aaPredicted RBP15.51■□□□□ 0.07
SGCE-202ENST00000415788 EHBP1Q8NDI1 1231 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 LMO3Q8TAP4 145 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 BCL7CQ8WUZ0 217 aaPredicted RBP15.51■□□□□ 0.07
SGCE-202ENST00000415788 ANKZF1Q9H8Y5 726 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 MYO1AQ9UBC5 1043 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 DSEQ9UL01 958 aa15.51■□□□□ 0.07
SGCE-202ENST00000415788 VGLL3A8MV65 326 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 EFEMP2O95967 443 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 SOD2P04179 222 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 FAM163BP0C2L3 166 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 ODC1P11926 461 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 TNNT3P45378 269 aaPredicted RBP15.5■□□□□ 0.07
SGCE-202ENST00000415788 BRCC3P46736 316 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 WHAMMP3Q1A5X7 153 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 SCARA3Q6AZY7 606 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 TOP6BLQ8N6T0 577 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 APPL2Q8NEU8 664 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 FAM71BQ8TC56 605 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 SPATA18Q8TC71 538 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 SENP8Q96LD8 212 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 FAM81BQ96LP2 452 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 NT5C1BQ96P26 610 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 NIF3L1Q9GZT8 377 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 INTS2Q9H0H0 1204 aaKnown RBP15.5■□□□□ 0.07
SGCE-202ENST00000415788 FAM124BQ9H5Z6 455 aaPredicted RBP15.5■□□□□ 0.07
SGCE-202ENST00000415788 MTUS1Q9ULD2 1270 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 PCDHB8Q9UN66 801 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 L1RE1Q9UN81 338 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 SNX9Q9Y5X1 595 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 CTAGE9A4FU28 777 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 H3BNC9 293 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 CYB561D2O14569 222 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 HUS1O60921 280 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 TYMPP19971 482 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 FECHP22830 423 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 USP41Q3LFD5 358 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 GPR65Q8IYL9 337 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 TMEM86AQ8N2M4 240 aa15.5■□□□□ 0.07
SGCE-202ENST00000415788 ERGIC2Q96RQ1 377 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms