RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 ZNF852Q6ZMS4 543 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 MAMSTRQ6ZN01 415 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 TMEM150AQ86TG1 271 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 CD302Q8IX05 232 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 PSMG2Q969U7 264 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 RMDN1Q96DB5 314 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 NELL2Q99435 816 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 OXCT2Q9BYC2 517 aaPredicted RBP13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 ZHX3Q9H4I2 956 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 ASB7Q9H672 318 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 BRD9Q9H8M2 597 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 PRMT8Q9NR22 394 aaPredicted RBP13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 ASAH2Q9NR71 780 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 TMLHEQ9NVH6 421 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 C2orf42Q9NWW7 574 aa13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 AGO2Q9UKV8 859 aaKnown RBP13.46□□□□□ -0.25
NCKIPSD-203ENST00000415281 FRMD3A2A2Y4 597 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 BMP15O95972 392 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 ZSCAN22P10073 491 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 FCHO2Q0JRZ9 810 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 TMEM132DQ14C87 1099 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 IQCEQ6IPM2 695 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 TXNDC11Q6PKC3 985 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 ARID3BQ8IVW6 561 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 LEMD2Q8NC56 503 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 GLIS3Q8NEA6 775 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 CHFRQ96EP1 664 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 LPIN3Q9BQK8 851 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 DPP3Q9NY33 737 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 C2CD2Q9Y426 696 aa13.45□□□□□ -0.26
NCKIPSD-203ENST00000415281 CYB561D2O14569 222 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 LAMTOR5O43504 91 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 PRAMEF12O95522 483 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 HOXD13P35453 343 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 ID4P47928 161 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 SOX9P48436 509 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 POU5F1Q01860 360 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 CCDC142Q17RM4 750 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 SLC39A12Q504Y0 691 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 WSCD1Q658N2 575 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 KIAA2013Q8IYS2 634 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 RIN3Q8TB24 985 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 KCNG4Q8TDN1 519 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 IRF7Q92985 503 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 ZFYVE19Q96K21 471 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 PKMYT1Q99640 499 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 SLC46A2Q9BY10 475 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 PANK2Q9BZ23 570 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 CHRDQ9H2X0 955 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 LMAN1LQ9HAT1 526 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 TBC1D7Q9P0N9 293 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 TFIP11Q9UBB9 837 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 HSFX1Q9UBD0 423 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 NDRG2Q9UN36 371 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 MORC2Q9Y6X9 1032 aaPredicted RBP13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 CEP250Q9BV73 2442 aa13.44□□□□□ -0.26
NCKIPSD-203ENST00000415281 ANAPC1Q9H1A4 1944 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 CHADO15335 359 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 HCRTO43612 131 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 F11P03951 625 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 HAPLN1P10915 354 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 ODC1P11926 461 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 CCNE1P24864 410 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 WEE1P30291 646 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 MAGEA9P43362 315 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 EPHB3P54753 998 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 MLLT6P55198 1093 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 CYP4F8P98187 520 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 DMWDQ09019 674 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 SLC39A14Q15043 492 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 SLFN12LQ6IEE8 588 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 USP37Q86T82 979 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 ELMOD1Q8N336 334 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 C1orf127Q8N9H9 656 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 STKLD1Q8NE28 680 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 DEPDC1BQ8WUY9 529 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 FAM3CQ92520 227 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 GPR88Q9GZN0 384 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 STK17AQ9UEE5 414 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 ASB3Q9Y575 518 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 PIAS3Q9Y6X2 628 aa13.43□□□□□ -0.26
NCKIPSD-203ENST00000415281 PTPRJQ12913 1337 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 OTOL1A6NHN0 477 aaPredicted RBP13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 MAN2B1O00754 1011 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 ZNF263O14978 683 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 TBCAO75347 108 aaKnown RBP13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 F13A1P00488 732 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 PAX3P23760 479 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 GABRR2P28476 465 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 ALDH1A3P47895 512 aa13.42□□□□□ -0.26
NCKIPSD-203ENST00000415281 GPR15P49685 360 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms