RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 C1orf112Q9NSG2 853 aa10.44□□□□□ -0.74
SS18-203ENST00000415083 TMOD2Q9NZR1 351 aa10.44□□□□□ -0.74
SS18-203ENST00000415083 RASA4BC9J798 803 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 RASA4O43374 803 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ABL2P42684 1182 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 RTP1P59025 263 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ENPEPQ07075 957 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 CXCL9Q07325 125 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ENOSF1Q7L5Y1 443 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 FEZF2Q8TBJ5 459 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 TMEM121Q9BTD3 319 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 TARS2Q9BW92 718 aaKnown RBP10.43□□□□□ -0.74
SS18-203ENST00000415083 STMN4Q9H169 189 aaPredicted RBP10.43□□□□□ -0.74
SS18-203ENST00000415083 SEPT9Q9UHD8 586 aaPredicted RBP10.43□□□□□ -0.74
SS18-203ENST00000415083 C15orf41Q9Y2V0 281 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ACTL7BQ9Y614 415 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 hCG_1818297A0A087WSY0 165 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 A0A0B4J269 797 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ABLIM1O14639 778 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 PRPF4O43172 522 aaKnown RBP eCLIP10.43□□□□□ -0.74
SS18-203ENST00000415083 SUN1O94901 812 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 UNC5CO95185 931 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 CD48P09326 243 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 PIK3CAP42336 1068 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 CDKN2BP42772 138 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 MSH2P43246 934 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 HIRAP54198 1017 aaPredicted RBP10.43□□□□□ -0.74
SS18-203ENST00000415083 IGDCC3Q8IVU1 814 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 DYDC1Q8WWB3 177 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 MIEF2Q96C03 454 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 SLC5A4Q9NY91 659 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 FBXO40Q9UH90 709 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 AGO2Q9UKV8 859 aaKnown RBP10.43□□□□□ -0.74
SS18-203ENST00000415083 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 PIGRP01833 764 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ARL2P36404 184 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 CAV1Q03135 178 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 TMEM132BQ14DG7 1078 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 MTERF2Q49AM1 385 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 CES4AQ5XG92 561 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 SPOCD1Q6ZMY3 1216 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 TDRPQ86YL5 185 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 LARGE2Q8N3Y3 721 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 PTPRN2Q92932 1015 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 KCNN1Q92952 543 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 C17orf75Q9HAS0 396 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 UBN1Q9NPG3 1134 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 RNF146Q9NTX7 359 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 RABGEF1Q9UJ41 708 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ZNRF3Q9ULT6 936 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 ADAMTS5Q9UNA0 930 aa10.43□□□□□ -0.74
SS18-203ENST00000415083 FAM47DPA6NHR8 397 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 SKAP2O75563 359 aaPredicted RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 GAS8O95995 478 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 GNAZP19086 355 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 TNNI1P19237 187 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 STX2P32856 288 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 STAT4Q14765 748 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 EMC2Q15006 297 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 TAF5Q15542 800 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 DRICH1Q6PGQ1 229 aaPredicted RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 RGS9BPQ6ZS82 235 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 GRK7Q8WTQ7 553 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 LPAR1Q92633 364 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 MCEEQ96PE7 176 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 DHRS4Q9BTZ2 278 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 MAP3K20Q9NYL2 800 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 PHTF1Q9UMS5 762 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 STK38LQ9Y2H1 464 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 GOLGA8SH3BPF8 625 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 GOLGA8MH3BSY2 632 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 ALOX15BO15296 676 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 DGAT1O75907 488 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 C1QAP02745 245 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 TARSP26639 723 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 MAN1A1P33908 653 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 ARSEP51690 589 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 SLC25A11Q02978 314 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 CCDC15Q0P6D6 951 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 EAPPQ56P03 285 aaPredicted RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 CYP4A22Q5TCH4 519 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 ANKMY2Q8IV38 441 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 SLC35B2Q8TB61 432 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 KLHL29Q96CT2 875 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 GPRASP2Q96D09 838 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 FAXDC2Q96IV6 333 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 MIPEPQ99797 713 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 NSRP1Q9H0G5 558 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 DHX33Q9H6R0 707 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 PLAC1Q9HBJ0 212 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 STARD13Q9Y3M8 1113 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 EDF1O60869 148 aaKnown RBP10.42□□□□□ -0.74
SS18-203ENST00000415083 TGFB2P61812 414 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 GPS1Q13098 491 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 SH2D5Q6ZV89 423 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 OTOAQ7RTW8 1153 aa10.42□□□□□ -0.74
SS18-203ENST00000415083 CCDC89Q8N998 374 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms