RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TMTC1Q8IUR5 882 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.24
SHMT2-202ENST00000414700 ABI1Q8IZP0 508 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 OLIG1Q8TAK6 271 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 DESI2Q9BSY9 194 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 HMGXB4Q9UGU5 601 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 ABHD14A-ACY1A0A1B0GW23 586 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 FAM170AA1A519 330 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 SERPING1P05155 500 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 TAF6P49848 677 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 CDK17Q00537 523 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 RNASELQ05823 741 aaKnown RBP16.57■□□□□ 0.24
SHMT2-202ENST00000414700 DSC1Q08554 894 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 ORC1Q13415 861 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 NPAS4Q8IUM7 802 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 REXO1L1PQ8IX06 675 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 URGCPQ8TCY9 931 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 SLC20A1Q8WUM9 679 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 LCMT1Q9UIC8 334 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 RRP15Q9Y3B9 282 aaKnown RBP16.57■□□□□ 0.24
SHMT2-202ENST00000414700 PCDHB4Q9Y5E5 795 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 TRIM66O15016 1216 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 FERP16591 822 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 PRKCIP41743 596 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 TNNC1P63316 161 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 FPGSQ05932 587 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 SOWAHAQ2M3V2 549 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 CD300LGQ6UXG3 332 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 COLGALT2Q8IYK4 626 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 GOLGA6L1Q8N7Z2 621 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 EPS8L1Q8TE68 723 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 TWNKQ96RR1 684 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 ARFGAP3Q9NP61 516 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 NME7Q9Y5B8 376 aa16.57■□□□□ 0.24
SHMT2-202ENST00000414700 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 I3L4J1 428 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 ZNF263O14978 683 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 HCRTO43612 131 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 B3GAT3O94766 335 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 ASTE1Q2TB18 679 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-202ENST00000414700 NOP9Q86U38 636 aaKnown RBP16.56■□□□□ 0.24
SHMT2-202ENST00000414700 DPF3Q92784 378 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 ZNF560Q96MR9 790 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 MRPL45Q9BRJ2 306 aaKnown RBP16.56■□□□□ 0.24
SHMT2-202ENST00000414700 HTATIP2Q9BUP3 242 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 ADAMTS1Q9UHI8 967 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 CNTN6Q9UQ52 1028 aa16.56■□□□□ 0.24
SHMT2-202ENST00000414700 DGKIO75912 1065 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 KIF4AO95239 1232 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 PFKMP08237 780 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 PBX3P40426 434 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 PNPLA4P41247 253 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 FAM43BQ6ZT52 329 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 PALB2Q86YC2 1186 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 RBBP8NLQ8NC74 664 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 ACRBPQ8NEB7 543 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 WHAMMQ8TF30 809 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 JAKMIP2Q96AA8 810 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 CCDC42Q96M95 316 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.247e-8■■□□□ 13.7
SHMT2-202ENST00000414700 SYT11Q9BT88 431 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 NRDE2Q9H7Z3 1164 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 GEMIN8Q9NWZ8 242 aaKnown RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 CXXC1Q9P0U4 656 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 EPN1Q9Y6I3 576 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 CHD9Q3L8U1 2897 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 A0A0U1RQJ8 604 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 NDUFA10O95299 355 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 IVLP07476 585 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 CYP11B1P15538 503 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 RPL9P32969 192 aaKnown RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 ACTN2P35609 894 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 BRCC3P46736 316 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 KIF11P52732 1056 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 ZNF132P52740 706 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 GFPT1Q06210 699 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 SV2CQ496J9 727 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 TIGD5Q53EQ6 642 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 DNAAF5Q86Y56 855 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 KBTBD7Q8WVZ9 684 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 ATRIPQ8WXE1 791 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 GDAP2Q9NXN4 497 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 KANSL3Q9P2N6 904 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 NOCTQ9UK39 431 aaKnown RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 L1RE1Q9UN81 338 aa16.55■□□□□ 0.24
SHMT2-202ENST00000414700 PRG3Q9Y2Y8 225 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-202ENST00000414700 A0A087X0T9 212 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 ZBBXA8MT70 800 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 FAM228BP0C875 321 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 P4HA1P13674 534 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 SSTR3P32745 418 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-202ENST00000414700 LMAN1P49257 510 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.243e-8■□□□□ 10.3
SHMT2-202ENST00000414700 TMEM240Q5SV17 173 aa16.54■□□□□ 0.24
SHMT2-202ENST00000414700 ICE2Q659A1 982 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms