RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 FAM187BQ17R55 369 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 FOXD4L6Q3SYB3 417 aaPredicted RBP9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 PRSS36Q5K4E3 855 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 TANGO2Q6ICL3 276 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 PDXDC1Q6P996 788 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 CD300LGQ6UXG3 332 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 FOXD4L3Q6VB84 417 aaPredicted RBP9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZNF852Q6ZMS4 543 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZBTB8OSQ8IWT0 167 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 SREK1Q8WXA9 508 aaKnown RBP9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 DNASE1L2Q92874 299 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 TCEAL4Q96EI5 215 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZNF396Q96N95 335 aaPredicted RBP9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 KIFC3Q9BVG8 833 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 CCDC113Q9H0I3 377 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 CHRDQ9H2X0 955 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 FZD8Q9H461 694 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 GOLGA2P5Q9HBQ8 144 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 GDAQ9Y2T3 454 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 DENND4CQ5VZ89 1909 aa9.03□□□□□ -0.96
UPF3AP1-201ENST00000413731 CACNA1GO43497 2377 aa9.02□□□□□ -0.96
UPF3AP1-201ENST00000413731 ARHGEF37A1IGU5 675 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 WDR27A2RRH5 827 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 NCAM2O15394 837 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 TBC1D4O60343 1298 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 B3GAT3O94766 335 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 ADRB1P08588 477 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 SDHBP21912 280 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 MUTP22033 750 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 MARCKSP29966 332 aaPredicted RBP9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 TXLNAP40222 546 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 UBA7P41226 1012 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 CCR2P41597 374 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 SPEM2Q0P670 501 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 PRPF4BQ13523 1007 aaKnown RBP9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 PKP1Q13835 747 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 UVSSAQ2YD98 709 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 PRR23BQ6ZRT6 265 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 MCPH1Q8NEM0 835 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 COL26A1Q96A83 441 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 ELSPBP1Q96BH3 223 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 BORCS6Q96GS4 357 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 AK8Q96MA6 479 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 PPP1R10Q96QC0 940 aaKnown RBP9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 USP28Q96RU2 1077 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 KCTD15Q96SI1 283 aaPredicted RBP9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 PLIN2Q99541 437 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 CORO1BQ9BR76 489 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 BHMT2Q9H2M3 363 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 AVENQ9NQS1 362 aaPredicted RBP9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 GDE1Q9NZC3 331 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 MRPS17Q9Y2R5 130 aaKnown RBP9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 BACE2Q9Y5Z0 518 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 OBSL1O75147 1896 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 MYO16Q9Y6X6 1858 aa9.02□□□□□ -0.97
UPF3AP1-201ENST00000413731 KIAA1549LQ6ZVL6 1849 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 E9PMD0 336 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 LRG1P02750 347 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 XRCC6P12956 609 aaKnown RBP eCLIP9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 LONP1P36776 959 aaKnown RBP9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 SATB1Q01826 763 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 GRIN1Q05586 938 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 DMWDQ09019 674 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 PTPAQ15257 358 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 MAPK6Q16659 721 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 UPP1Q16831 310 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 ST3GAL2Q16842 350 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 DCAF4L1Q3SXM0 396 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 PPM1JQ5JR12 505 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 FAM78AQ5JUQ0 283 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 ANKS3Q6ZW76 656 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 CEP120Q8N960 986 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 DEPTORQ8TB45 409 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 CALML4Q96GE6 196 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 NELL2Q99435 816 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 ADPGKQ9BRR6 497 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 C1QTNF2Q9BXJ5 285 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 FAM126AQ9BYI3 521 aaPredicted RBP9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 C2orf40Q9H1Z8 148 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 BRD9Q9H8M2 597 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 DNM3Q9UQ16 869 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 FCF1Q9Y324 198 aaKnown RBP9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 INSL5Q9Y5Q6 135 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 PIAS3Q9Y6X2 628 aa9.01□□□□□ -0.97
UPF3AP1-201ENST00000413731 TCHHQ07283 1943 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 ACKR2O00590 384 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 PRRG1O14668 218 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 SLC30A4O14863 429 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 SEC24AO95486 1093 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 MPSTP25325 297 aa9□□□□□ -0.97
UPF3AP1-201ENST00000413731 ERCC5P28715 1186 aaPredicted RBP9□□□□□ -0.97
UPF3AP1-201ENST00000413731 NAMPTP43490 491 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms