RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TDGQ13569 410 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 KCNB1Q14721 858 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 SLC5A9Q2M3M2 681 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 SLC39A12Q504Y0 691 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 CENPPQ6IPU0 288 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 TRAPPC11Q7Z392 1133 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 UBALD2Q8IYN6 164 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 ELMOD1Q8N336 334 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 PDCL2Q8N4E4 241 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 TTC9BQ8N6N2 239 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 ATAD1Q8NBU5 361 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 ING5Q8WYH8 240 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 ZNF516Q92618 1163 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 FGF13Q92913 245 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 CCDC34Q96HJ3 373 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 HPDLQ96IR7 371 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 ZCWPW1Q9H0M4 648 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 GZF1Q9H116 711 aaPredicted RBP15.94■□□□□ 0.14
LIMS4-201ENST00000413601 DMAC2Q9NW81 257 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 GDAP2Q9NXN4 497 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 CEP72Q9P209 647 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 IGSF9Q9P2J2 1179 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 CDH7Q9ULB5 785 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
LIMS4-201ENST00000413601 L1RE1Q9UN81 338 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 SLC27A5Q9Y2P5 690 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 R3HCC1Q9Y3T6 440 aaKnown RBP15.94■□□□□ 0.14
LIMS4-201ENST00000413601 YIPF1Q9Y548 306 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 SNX9Q9Y5X1 595 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 KMT2EQ8IZD2 1858 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 PRPF40AO75400 957 aaKnown RBP15.93■□□□□ 0.14
LIMS4-201ENST00000413601 NR3C1P04150 777 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 MYO1EQ12965 1108 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 LRRTM3Q86VH5 581 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 SLC9A9Q8IVB4 645 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 HS6ST3Q8IZP7 471 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 PLEKHO2Q8TD55 490 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 PBXIP1Q96AQ6 731 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 ASIC4Q96FT7 647 aa15.93■□□□□ 0.14
LIMS4-201ENST00000413601 ZNF512Q96ME7 567 aaPredicted RBP15.93■□□□□ 0.14
LIMS4-201ENST00000413601 MRPS23Q9Y3D9 190 aaKnown RBP15.93■□□□□ 0.14
LIMS4-201ENST00000413601 ZFP37Q9Y6Q3 630 aaPredicted RBP15.93■□□□□ 0.14
LIMS4-201ENST00000413601 CALUO43852 315 aaPredicted RBP15.92■□□□□ 0.14
LIMS4-201ENST00000413601 SOAT2O75908 522 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 KIF20AO95235 890 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 CST3P01034 146 aaPredicted RBP15.92■□□□□ 0.14
LIMS4-201ENST00000413601 HTR4Q13639 388 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 SOWAHAQ2M3V2 549 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 IQCEQ6IPM2 695 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 NPAS3Q8IXF0 933 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 SMYD4Q8IYR2 804 aaPredicted RBP15.92■□□□□ 0.14
LIMS4-201ENST00000413601 TMEM174Q8WUU8 243 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 ERCC4Q92889 916 aaPredicted RBP15.92■□□□□ 0.14
LIMS4-201ENST00000413601 TCEAL4Q96EI5 215 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 AVENQ9NQS1 362 aaPredicted RBP15.92■□□□□ 0.14
LIMS4-201ENST00000413601 PTPRDP23468 1912 aa15.92■□□□□ 0.14
LIMS4-201ENST00000413601 OBSL1O75147 1896 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 ANHXE9PGG2 379 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 NARSO43776 548 aaKnown RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 GADD45BO75293 160 aaPredicted RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 CEBPBP17676 345 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 ACAT1P24752 427 aaKnown RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 CCR2P41597 374 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 ALDH1A3P47895 512 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 EPHB3P54753 998 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 PRSS36Q5K4E3 855 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 CEP135Q66GS9 1140 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 PARM1Q6UWI2 310 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 PDZD4Q76G19 769 aaPredicted RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 BMP8AQ7Z5Y6 402 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 OSTM1Q86WC4 334 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 DCP1BQ8IZD4 617 aaKnown RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 ADGRF2Q8IZF7 708 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 TMEM86AQ8N2M4 240 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 GUF1Q8N442 669 aaKnown RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 SLC44A3Q8N4M1 653 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 TOP6BLQ8N6T0 577 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 PARD3BQ8TEW8 1205 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 FGF14Q92915 247 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 NXPE3Q969Y0 559 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 MCRS1Q96EZ8 462 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 RPP25Q9BUL9 199 aaKnown RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 DNAJC25Q9H1X3 360 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 DDX43Q9NXZ2 648 aaKnown RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 DUSP12Q9UNI6 340 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 TRAF3IP3Q9Y228 551 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 NUMBLQ9Y6R0 609 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 GREB1Q4ZG55 1949 aa15.91■□□□□ 0.14
LIMS4-201ENST00000413601 ZNF638Q14966 1978 aaKnown RBP15.91■□□□□ 0.14
LIMS4-201ENST00000413601 LRRIQ3A6PVS8 624 aaPredicted RBP15.9■□□□□ 0.14
LIMS4-201ENST00000413601 NRG2O14511 850 aaPredicted RBP15.9■□□□□ 0.14
LIMS4-201ENST00000413601 HCRTO43612 131 aa15.9■□□□□ 0.14
LIMS4-201ENST00000413601 PDGFBP01127 241 aaPredicted RBP15.9■□□□□ 0.14
LIMS4-201ENST00000413601 MYL4P12829 197 aa15.9■□□□□ 0.14
LIMS4-201ENST00000413601 DLG4P78352 724 aa15.9■□□□□ 0.14
LIMS4-201ENST00000413601 MYL7Q01449 175 aa15.9■□□□□ 0.14
LIMS4-201ENST00000413601 TSPY1Q01534 308 aa15.9■□□□□ 0.14
LIMS4-201ENST00000413601 PLD1Q13393 1074 aa15.9■□□□□ 0.14
LIMS4-201ENST00000413601 CYP4A22Q5TCH4 519 aa15.9■□□□□ 0.14
LIMS4-201ENST00000413601 POTEHQ6S545 545 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms