RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 LIMS2Q7Z4I7 341 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 THEM5Q8N1Q8 247 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 PDCL2Q8N4E4 241 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 TOP6BLQ8N6T0 577 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 TDRD5Q8NAT2 981 aaKnown RBP10.83□□□□□ -0.68
TMEM248-202ENST00000413593 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 PGLYRP2Q96PD5 576 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 ZCWPW1Q9H0M4 648 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 POLIQ9UNA4 740 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 PLXNA3P51805 1871 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 MTMR11A4FU01 709 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 DCXO43602 365 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 N4BP1O75113 896 aaKnown RBP10.82□□□□□ -0.68
TMEM248-202ENST00000413593 LRG1P02750 347 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 BMP6P22004 513 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 PSMC2P35998 433 aaKnown RBP10.82□□□□□ -0.68
TMEM248-202ENST00000413593 NTHL1P78549 312 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 BIRC3Q13489 604 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 TRPC3Q13507 836 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 MORC3Q14149 939 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 SOWAHAQ2M3V2 549 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 TDRD10Q5VZ19 366 aaKnown RBP10.82□□□□□ -0.68
TMEM248-202ENST00000413593 ISM2Q6H9L7 571 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 INTS8Q75QN2 995 aaKnown RBP10.82□□□□□ -0.68
TMEM248-202ENST00000413593 DPH6Q7L8W6 267 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 GRASPQ7Z6J2 395 aaPredicted RBP10.82□□□□□ -0.68
TMEM248-202ENST00000413593 OSTM1Q86WC4 334 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 FAM186BQ8IYM0 893 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 ZDHHC14Q8IZN3 488 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 ATAD1Q8NBU5 361 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 SPATA18Q8TC71 538 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 ACSF2Q96CM8 615 aaPredicted RBP10.82□□□□□ -0.68
TMEM248-202ENST00000413593 XYLT2Q9H1B5 865 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 CRISPLD1Q9H336 500 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 EPHX3Q9H6B9 360 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 HCFC1R1Q9NWW0 138 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 DNMT3BQ9UBC3 853 aaKnown RBP10.82□□□□□ -0.68
TMEM248-202ENST00000413593 MUTYHQ9UIF7 546 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 YIPF1Q9Y548 306 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 ANK1P16157 1881 aa10.82□□□□□ -0.68
TMEM248-202ENST00000413593 PI4K2BG5E9Z4 385 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 BIN1O00499 593 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 GABRDO14764 452 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 PSMA7O14818 248 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 IKBKBO14920 756 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 CETN3O15182 167 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 PHACTR2O75167 634 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 VNN1O95497 513 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 STAU1O95793 577 aaKnown RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 C4BPAP04003 597 aaKnown RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ALADP13716 330 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 FSHRP23945 695 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 CCNE1P24864 410 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ATICP31939 592 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 VAMP7P51809 220 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 PMS1P54277 932 aaKnown RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 MCCD1P59942 119 aaPredicted RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 MYL6P60660 151 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 LRRC63Q05C16 580 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ENPEPQ07075 957 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 DUSP4Q13115 394 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 STIM1Q13586 685 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 CAMK4Q16566 473 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 WDR72Q3MJ13 1102 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ZACNQ401N2 412 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 PABPC1LQ4VXU2 614 aaKnown RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 SLC39A12Q504Y0 691 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ANKRD40Q6AI12 368 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 GET4Q7L5D6 327 aaPredicted RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 LRRTM3Q86VH5 581 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ZC3H3Q8IXZ2 948 aaKnown RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 DCP1BQ8IZD4 617 aaKnown RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ADGRF2Q8IZF7 708 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 TTC9BQ8N6N2 239 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 KBTBD7Q8WVZ9 684 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 EEF2KMTQ96G04 330 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 DHTKD1Q96HY7 919 aaPredicted RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 MYADMQ96S97 322 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 TSG101Q99816 390 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 ACBD6Q9BR61 282 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 MKNK1Q9BUB5 465 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 DDX43Q9NXZ2 648 aaKnown RBP10.81□□□□□ -0.68
TMEM248-202ENST00000413593 CEP72Q9P209 647 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 HSFX1Q9UBD0 423 aa10.81□□□□□ -0.68
TMEM248-202ENST00000413593 TRIM49BA6NDI0 452 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 PPP1R3GB7ZBB8 358 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 HCRTO43612 131 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 RHOP08100 348 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 TRIM49P0CI25 452 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 TRIM49CP0CI26 452 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 KRT13P13646 458 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 PTPN2P17706 415 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 WARSP23381 471 aaKnown RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 ACAT1P24752 427 aaKnown RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 PCSK1P29120 753 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 GBP2P32456 591 aaPredicted RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 PPP1R2P41236 205 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 LHX1P48742 406 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 CLCN6P51797 869 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms