RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 TRIM50Q86XT4 487 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 IPO4Q8TEX9 1081 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 MCEEQ96PE7 176 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 FZD8Q9H461 694 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 CCDC134Q9H6E4 229 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 ELP3Q9H9T3 547 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 PTPRHQ9HD43 1115 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 ADARB2Q9NS39 739 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 INO80B-WBP1J3KQ70 363 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 ASAP2O43150 1006 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 TCEA3O75764 348 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 FSBPO95073 299 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 KRT1P04264 644 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 HOXC6P09630 235 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 WEE2P0C1S8 567 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 KYNUQ16719 465 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 TMEM132AQ24JP5 1023 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 IZUMO3Q5VZ72 239 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 DRICH1Q6PGQ1 229 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 EXOC3L1Q86VI1 746 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 RELL1Q8IUW5 271 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 THNSL1Q8IYQ7 743 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 ZNF317Q96PQ6 595 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 INO80BQ9C086 356 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 SMARCAD1Q9H4L7 1026 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 DDX56Q9NY93 547 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 STRIP2Q9ULQ0 834 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 ADM5C9JUS6 153 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 KLRC2P26717 231 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 POLR2BP30876 1174 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 LACTBP83111 547 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 R3HDM1Q15032 1099 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ATP13A4Q4VNC1 1196 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ANKS1BQ7Z6G8 1248 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 WDTC1Q8N5D0 677 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ARHGEF2Q92974 986 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 FAM118BQ9BPY3 351 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 XYLT2Q9H1B5 865 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 AGTPBP1Q9UPW5 1226 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 F8VP50 259 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 LIASO43766 372 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 HBP1O60381 514 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 KRT10P13645 584 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ATF7P17544 494 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ASPAP45381 313 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ZNF252P-AS1Q0IIN9 211 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 PPP1R15BQ5SWA1 713 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 KAZNQ674X7 775 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 MFSD7Q6UXD7 560 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ANKRD13AQ8IZ07 590 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 NIPA2Q8N8Q9 360 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 FGD4Q96M96 766 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 MMP19Q99542 508 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 CCDC77Q9BR77 488 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 KLHL11Q9NVR0 708 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 NINJ2Q9NZG7 142 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 DRG1Q9Y295 367 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 CAPN7Q9Y6W3 813 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 PTPRFP10586 1907 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 DNAJC25-GNG10A0A024R161 153 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 GOLGA6L7A0A1B0GV03 622 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 MED7O43513 233 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 DDNO94850 711 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 IL18RAPO95256 599 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 PTPN7P35236 360 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 CNGA2Q16280 664 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 HIBCHQ6NVY1 386 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 EFCAB12Q6NXP0 572 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 SPOCD1Q6ZMY3 1216 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 TFAP2BQ92481 460 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 P3H4Q92791 437 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 PRMT1Q99873 361 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 R3HDMLQ9H3Y0 253 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 RPF1Q9H9Y2 349 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 DNAJC17Q9NVM6 304 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 RBPJLQ9UBG7 517 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 ZNF148Q9UQR1 794 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
TRAFD1-202ENST00000412615 H0YHG0 523 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 TXNP10599 105 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 TCF4P15884 667 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 OSTNP61366 133 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 OGDHQ02218 1023 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 P3H1Q32P28 736 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 CCDC38Q502W7 563 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 ZCCHC9Q8N567 271 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms