RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PLEKHO2Q8TD55 490 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 ZNF516Q92618 1163 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 HPDLQ96IR7 371 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 CORO1BQ9BR76 489 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 ZCWPW1Q9H0M4 648 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 KCNK12Q9HB15 430 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 GDAP2Q9NXN4 497 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 L1RE1Q9UN81 338 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 SNX9Q9Y5X1 595 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 GREB1Q4ZG55 1949 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 GADD45BO75293 160 aaPredicted RBP20.26■□□□□ 0.83
TRIM56-202ENST00000412507 PRPF40AO75400 957 aaKnown RBP20.26■□□□□ 0.83
TRIM56-202ENST00000412507 RHOP08100 348 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 ANP32AP39687 249 aaKnown RBP20.26■□□□□ 0.83
TRIM56-202ENST00000412507 SIGLEC14Q08ET2 396 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 MYO1EQ12965 1108 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 MTMR3Q13615 1198 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 SLC39A12Q504Y0 691 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 CENPPQ6IPU0 288 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 SMYD4Q8IYR2 804 aaPredicted RBP20.26■□□□□ 0.83
TRIM56-202ENST00000412507 GUF1Q8N442 669 aaKnown RBP20.26■□□□□ 0.83
TRIM56-202ENST00000412507 ATAD1Q8NBU5 361 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 RSAD2Q8WXG1 361 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 ERCC4Q92889 916 aaPredicted RBP20.26■□□□□ 0.83
TRIM56-202ENST00000412507 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 CEP72Q9P209 647 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 TRAF3IP3Q9Y228 551 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 SLC27A5Q9Y2P5 690 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 YIPF1Q9Y548 306 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 ZNF318Q5VUA4 2279 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 KMT2EQ8IZD2 1858 aa20.26■□□□□ 0.83
TRIM56-202ENST00000412507 TMEM221A6NGB7 291 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 M0R296 226 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 CST3P01034 146 aaPredicted RBP20.25■□□□□ 0.83
TRIM56-202ENST00000412507 SLC5A9Q2M3M2 681 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 LRRTM3Q86VH5 581 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 ELMOD1Q8N336 334 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 TTC9BQ8N6N2 239 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 ST13P5Q8NFI4 369 aaPredicted RBP20.25■□□□□ 0.83
TRIM56-202ENST00000412507 PARD3BQ8TEW8 1205 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 TMEM174Q8WUU8 243 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 ING5Q8WYH8 240 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 FGF13Q92913 245 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 ZNF512Q96ME7 567 aaPredicted RBP20.25■□□□□ 0.83
TRIM56-202ENST00000412507 TIGD1Q96MW7 591 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 IGSF9Q9P2J2 1179 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 CDH7Q9ULB5 785 aa20.25■□□□□ 0.83
TRIM56-202ENST00000412507 MRPS23Q9Y3D9 190 aaKnown RBP20.25■□□□□ 0.83
TRIM56-202ENST00000412507 TDGQ13569 410 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 SOWAHAQ2M3V2 549 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 HFE2Q6ZVN8 426 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 OSTM1Q86WC4 334 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 UBALD2Q8IYN6 164 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 HS6ST3Q8IZP7 471 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 TMEM86AQ8N2M4 240 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 TOP6BLQ8N6T0 577 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 RMND1Q9NWS8 449 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 DDX43Q9NXZ2 648 aaKnown RBP20.24■□□□□ 0.83
TRIM56-202ENST00000412507 ZFP37Q9Y6Q3 630 aaPredicted RBP20.24■□□□□ 0.83
TRIM56-202ENST00000412507 ZDBF2Q9HCK1 2354 aa20.24■□□□□ 0.83
TRIM56-202ENST00000412507 NUP210Q8TEM1 1887 aaPredicted RBP20.24■□□□□ 0.83
TRIM56-202ENST00000412507 LRRIQ3A6PVS8 624 aaPredicted RBP20.23■□□□□ 0.83
TRIM56-202ENST00000412507 SOAT2O75908 522 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 COL9A1P20849 921 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 NR2F2P24468 414 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 ACAT1P24752 427 aaKnown RBP20.23■□□□□ 0.83
TRIM56-202ENST00000412507 MYL7Q01449 175 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 IQCEQ6IPM2 695 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 DCP1BQ8IZD4 617 aaKnown RBP20.23■□□□□ 0.83
TRIM56-202ENST00000412507 ADGRF2Q8IZF7 708 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 TCEAL4Q96EI5 215 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 ASIC4Q96FT7 647 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 GSDMAQ96QA5 445 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 AVENQ9NQS1 362 aaPredicted RBP20.23■□□□□ 0.83
TRIM56-202ENST00000412507 FRMD4BQ9Y2L6 1034 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 PCDHA5Q9Y5H7 936 aa20.23■□□□□ 0.83
TRIM56-202ENST00000412507 ANAPC1Q9H1A4 1944 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 HCRTO43612 131 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 SMC2O95347 1197 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 CEBPBP17676 345 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 CCR2P41597 374 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 ALDH1A3P47895 512 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 EPHB3P54753 998 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 DLG4P78352 724 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 TSPY1Q01534 308 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 PLD1Q13393 1074 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 TRPC3Q13507 836 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 NFIL3Q16649 462 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 PRSS36Q5K4E3 855 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 PDZD4Q76G19 769 aaPredicted RBP20.22■□□□□ 0.83
TRIM56-202ENST00000412507 DPH6Q7L8W6 267 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 NPAS3Q8IXF0 933 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 MCRS1Q96EZ8 462 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 SEPT5Q99719 369 aaPredicted RBP20.22■□□□□ 0.83
TRIM56-202ENST00000412507 ACBD6Q9BR61 282 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 DNAJC25Q9H1X3 360 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 TMLHEQ9NVH6 421 aa20.22■□□□□ 0.83
TRIM56-202ENST00000412507 RAPGEFL1Q9UHV5 662 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms