RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 PRDM12Q9H4Q4 367 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 SLC28A3Q9HAS3 691 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 RIC8AQ9NPQ8 531 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 KCND1Q9NSA2 647 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 BARHL2Q9NY43 387 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 OGFRQ9NZT2 677 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ZNF215Q9UL58 517 aaPredicted RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 TELO2Q9Y4R8 837 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 UBIAD1Q9Y5Z9 338 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 NLRC5Q86WI3 1866 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 GSTTP1A0A1W2PQM5 241 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 SMCO2A6NFE2 343 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 NUDT19A8MXV4 375 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 KIF28PB7ZC32 967 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 STXBP3O00186 592 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 RGS13O14921 159 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 MAFGO15525 162 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 NBNO60934 754 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 BAIAP3O94812 1187 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 GNAT1P11488 350 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 SCG2P13521 617 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 MYOGP15173 224 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 KCNA2P16389 499 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 PRKCAP17252 672 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 GBP1P32455 592 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 TCF7P36402 384 aaPredicted RBP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 KCNJ6P48051 423 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 AKAP17AQ02040 695 aaKnown RBP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 RAD51AP2Q09MP3 1159 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 MTMR1Q13613 665 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 GPNMBQ14956 572 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 PFKFB3Q16875 520 aaPredicted RBP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 PLEKHN1Q494U1 663 aaPredicted RBP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 SLCO6A1Q86UG4 719 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 SERINC5Q86VE9 423 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 FBXL16Q8N461 479 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 PHOSPHO2Q8TCD6 241 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 FNIP1Q8TF40 1166 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 CCDC12Q8WUD4 166 aaPredicted RBP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 SEPT1Q8WYJ6 367 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 PGBD1Q96JS3 809 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 FUCA2Q9BTY2 467 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 AGXT2Q9BYV1 514 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 GLT8D2Q9H1C3 349 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 RNPEPQ9H4A4 650 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 SETD4Q9NVD3 440 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 TMEM260Q9NX78 707 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 REV1Q9UBZ9 1251 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 SUSD2Q9UGT4 822 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 MORC2Q9Y6X9 1032 aaPredicted RBP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 NID2Q14112 1375 aa5.93□□□□□ -1.46
LINC00342-201ENST00000412393 PRRC2BQ5JSZ5 2229 aaKnown RBP5.93□□□□□ -1.46
LINC00342-201ENST00000412393 COL4A4P53420 1690 aaPredicted RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 ABHD14A-ACY1A0A1B0GW23 586 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 ESYT2A0FGR8 921 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 RSPH10B2B2RC85 870 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 PRPF3O43395 683 aaKnown RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 EFCAB14O75071 495 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CAVIN2O95810 425 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CXCL10P02778 98 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CTSHP09668 335 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 RSPH10BP0C881 870 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 ARP10275 920 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 PDIA3P30101 505 aaKnown RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 HOXC8P31273 242 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 ZNF76P36508 570 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 SREBF1P36956 1147 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 THPOP40225 353 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 HMGA2P52926 109 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 WDR5P61964 334 aaKnown RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CCT2P78371 535 aaKnown RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 TCTN1Q2MV58 587 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CEP55Q53EZ4 464 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CCDC183Q5T5S1 534 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 JAKMIP3Q5VZ66 844 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 MCTP2Q6DN12 878 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 RUFY3Q7L099 469 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 HERC6Q8IVU3 1022 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 REXO1Q8N1G1 1221 aaKnown RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 DBF4BQ8NFT6 615 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CYP2W1Q8TAV3 490 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 LMBR1Q8WVP7 490 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 GLG1Q92896 1179 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 PHKBQ93100 1093 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 TMX3Q96JJ7 454 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 SDF4Q9BRK5 362 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 SLC26A6Q9BXS9 759 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 RNF26Q9BY78 433 aaPredicted RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 TM6SF1Q9BZW5 370 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 SMARCAD1Q9H4L7 1026 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 C6orf50Q9HD87 102 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 KCNH7Q9NS40 1196 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 SLC9A2Q9UBY0 812 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 GPR55Q9Y2T6 319 aaPredicted RBP5.92□□□□□ -1.46
LINC00342-201ENST00000412393 CYP46A1Q9Y6A2 500 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 PMF1-BGLAPU3KQ54 211 aa5.92□□□□□ -1.46
LINC00342-201ENST00000412393 TCF20Q9UGU0 1960 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms