RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PLA2G6O60733 806 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 TMCC2O75069 709 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 RAP2AP10114 183 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 CKMT1AP12532 417 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 ALDH1A3P47895 512 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 FMO1Q01740 532 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 CREMQ03060 361 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 MRPL49Q13405 166 aaKnown RBP5.21□□□□□ -1.58
BRCA1-204ENST00000412061 PLS1Q14651 629 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 SURF1Q15526 300 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 NT5DC1Q5TFE4 455 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 CCDC30Q5VVM6 783 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 SPATA1Q5VX52 437 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 ZKSCAN2Q63HK3 967 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 AFMIDQ63HM1 303 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 JMJD6Q6NYC1 403 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-204ENST00000412061 FASTKD5Q7L8L6 764 aaKnown RBP5.21□□□□□ -1.58
BRCA1-204ENST00000412061 PLXDC1Q8IUK5 500 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 TMTC1Q8IUR5 882 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 GALNT15Q8N3T1 639 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 SH2D3CQ8N5H7 860 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 IL31RAQ8NI17 732 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 BRIX1Q8TDN6 353 aaKnown RBP5.21□□□□□ -1.58
BRCA1-204ENST00000412061 ANKS1AQ92625 1134 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 MUL1Q969V5 352 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 NEIL1Q96FI4 390 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-204ENST00000412061 ZC3H10Q96K80 434 aaKnown RBP5.21□□□□□ -1.58
BRCA1-204ENST00000412061 TTC14Q96N46 770 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 TCF25Q9BQ70 676 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 SEC61A2Q9H9S3 476 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 OBP2BQ9NPH6 170 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 SMYD2Q9NRG4 433 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 CNNM1Q9NRU3 951 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 GJB4Q9NTQ9 266 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 OAZ3Q9UMX2 235 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 RUVBL1Q9Y265 456 aaKnown RBP5.21□□□□□ -1.58
BRCA1-204ENST00000412061 TTLL3Q9Y4R7 772 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 ZMYM3Q14202 1370 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 ATRNL1Q5VV63 1379 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 A0A1W2PPL8 197 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 UBE2QL1A1L167 161 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 ANKRD18BA2A2Z9 1011 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 A6NLC8 198 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 B4E171 279 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 MATN2O00339 956 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 CD1AP06126 327 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 KITP10721 976 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 ATP1A3P13637 1013 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 BRAFP15056 766 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 CR2P20023 1033 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 EEF1GP26641 437 aaKnown RBP5.2□□□□□ -1.58
BRCA1-204ENST00000412061 SLC7A1P30825 629 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 TSPAN7P41732 249 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 RAD52P43351 418 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 TUBP50607 506 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 PPP2CBP62714 309 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 PPP2CAP67775 309 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 CNGA2Q16280 664 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 SLC35G1Q2M3R5 365 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 FLYWCH1Q4VC44 716 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 MFSD14BQ5SR56 506 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 OTUD7BQ6GQQ9 843 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 SESTD1Q86VW0 696 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 HEATR4Q86WZ0 1026 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 TXLNBQ8N3L3 684 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 PCYOX1LQ8NBM8 494 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 C18orf8Q96DM3 657 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 CEP95Q96GE4 821 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 TOX2Q96NM4 488 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 NELL2Q99435 816 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 CHCHD6Q9BRQ6 235 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 COLEC11Q9BWP8 271 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 C11orf54Q9H0W9 315 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-204ENST00000412061 EPC1Q9H2F5 836 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 NELFAQ9H3P2 528 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 PRKRIP1Q9H875 184 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-204ENST00000412061 SARS2Q9NP81 518 aaKnown RBP5.2□□□□□ -1.58
BRCA1-204ENST00000412061 WASH6PQ9NQA3 447 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 USP40Q9NVE5 1235 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 IRAK4Q9NWZ3 460 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 ITGB1BP2Q9UKP3 347 aa5.2□□□□□ -1.58
BRCA1-204ENST00000412061 LGALS16A8MUM7 142 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 NT5C1B-RDH14C9J2C7 533 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 F2RL2O00254 374 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 ACKR2O00590 384 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 CDC14BO60729 498 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 TIPRLO75663 272 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 DDX58O95786 925 aaKnown RBP5.19□□□□□ -1.58
BRCA1-204ENST00000412061 TBX18O95935 607 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 RPN1P04843 607 aaKnown RBP5.19□□□□□ -1.58
BRCA1-204ENST00000412061 SNRPA1P09661 255 aaKnown RBP5.19□□□□□ -1.58
BRCA1-204ENST00000412061 XBP1P17861 261 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 ATP5JP18859 108 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 PRDX5P30044 214 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 KRT20P35900 424 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 TIGD6Q17RP2 521 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 PABPC1LQ4VXU2 614 aaKnown RBP5.19□□□□□ -1.58
BRCA1-204ENST00000412061 SEM1Q6ZVN7 128 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 GET4Q7L5D6 327 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms