RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 GOLGA8JA6NMD2 632 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 PRPF6O94906 941 aaKnown RBP24.09■■□□□ 1.45
MSH6-202ENST00000411819 HSP90AA1P07900 732 aaKnown RBP24.09■■□□□ 1.45
MSH6-202ENST00000411819 PSMC3P17980 439 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 GARTP22102 1010 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 VIPR2P41587 438 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 WNT7BP56706 349 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 MGAT5BQ3V5L5 792 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 WSCD1Q658N2 575 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 HSCBQ8IWL3 235 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 CBWD1Q9BRT8 395 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 ZCWPW1Q9H0M4 648 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 PCIF1Q9H4Z3 704 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 TMEM206Q9H813 350 aa24.09■■□□□ 1.45
MSH6-202ENST00000411819 SPATA6Q9NWH7 488 aaPredicted RBP24.09■■□□□ 1.45
MSH6-202ENST00000411819 KPNA7A9QM74 516 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 TARSP26639 723 aaKnown RBP24.08■■□□□ 1.45
MSH6-202ENST00000411819 POLR2BP30876 1174 aaKnown RBP24.08■■□□□ 1.45
MSH6-202ENST00000411819 GDI1P31150 447 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 ZNF852Q6ZMS4 543 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 ITIH5Q86UX2 942 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 KCNG4Q8TDN1 519 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 DEPDC1BQ8WUY9 529 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 IRF7Q92985 503 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 PSMG2Q969U7 264 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 LRRC3Q9BY71 257 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 OSBPL6Q9BZF3 934 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 GPR88Q9GZN0 384 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 TNMDQ9H2S6 317 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 ZNF334Q9HCZ1 680 aaPredicted RBP24.08■■□□□ 1.45
MSH6-202ENST00000411819 ASB3Q9Y575 518 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 CACNA1IQ9P0X4 2223 aa24.08■■□□□ 1.45
MSH6-202ENST00000411819 PTPRZ1P23471 2315 aaPredicted RBP24.07■■□□□ 1.44
MSH6-202ENST00000411819 COL4A2P08572 1712 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 FAM186AA6NE01 2351 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 PPP6R2O75170 966 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 ITGB3P05106 788 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 PNPLA4P41247 253 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 VEPH1Q14D04 833 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 FOXD4L6Q3SYB3 417 aaPredicted RBP24.07■■□□□ 1.44
MSH6-202ENST00000411819 STXBP5Q5T5C0 1151 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 ZC3H14Q6PJT7 736 aaKnown RBP24.07■■□□□ 1.44
MSH6-202ENST00000411819 FOXD4L3Q6VB84 417 aaPredicted RBP24.07■■□□□ 1.44
MSH6-202ENST00000411819 STXBP4Q6ZWJ1 553 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 DNAJB7Q7Z6W7 309 aaPredicted RBP24.07■■□□□ 1.44
MSH6-202ENST00000411819 SNX21Q969T3 373 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 DHX58Q96C10 678 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 LPIN3Q9BQK8 851 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 LRRC27Q9C0I9 530 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 ATXN3LQ9H3M9 355 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 HSFX1Q9UBD0 423 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 AGAP1Q9UPQ3 857 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 MRPS17Q9Y2R5 130 aaKnown RBP24.07■■□□□ 1.44
MSH6-202ENST00000411819 RIF1Q5UIP0 2472 aaKnown RBP24.07■■□□□ 1.44
MSH6-202ENST00000411819 NCANO14594 1321 aa24.07■■□□□ 1.44
MSH6-202ENST00000411819 HEPACAM2A8MVW5 462 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 NCAM2O15394 837 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 LAMTOR5O43504 91 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 EXTL3O43909 919 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 YEATS4O95619 227 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 SP9P0CG40 484 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 GABRR2P28476 465 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 TUFMP49411 452 aaKnown RBP24.06■■□□□ 1.44
MSH6-202ENST00000411819 YAF2Q8IY57 180 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 ADSSL1Q8N142 457 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 C1orf127Q8N9H9 656 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 CACTINQ8WUQ7 758 aaKnown RBP24.06■■□□□ 1.44
MSH6-202ENST00000411819 HPS3Q969F9 1004 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 TRPV4Q9HBA0 871 aa24.06■■□□□ 1.44
MSH6-202ENST00000411819 ABI2Q9NYB9 513 aaPredicted RBP24.06■■□□□ 1.44
MSH6-202ENST00000411819 NDRG2Q9UN36 371 aaKnown RBP24.06■■□□□ 1.44
MSH6-202ENST00000411819 NUP210Q8TEM1 1887 aaPredicted RBP24.06■■□□□ 1.44
MSH6-202ENST00000411819 ZNF263O14978 683 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 CUTAO60888 179 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 FGF19O95750 216 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 KRT19P08727 400 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 TMEM191BP0C7N4 346 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 MAGEA9P43362 315 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 ASIC1P78348 528 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 BFSP1Q12934 665 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 E2F4Q16254 413 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 TAF12Q16514 161 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 ARHGAP15Q53QZ3 475 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 GAREM2Q75VX8 874 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 DCP1BQ8IZD4 617 aaKnown RBP24.05■■□□□ 1.44
MSH6-202ENST00000411819 GPD1LQ8N335 351 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 GLIS3Q8NEA6 775 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 SPPL2BQ8TCT7 592 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 BORCS6Q96GS4 357 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 FAM84AQ96KN4 292 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 GCNAQ96QF7 691 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 NELL2Q99435 816 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 TRIM9Q9C026 710 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 CUEDC2Q9H467 287 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 PDE11AQ9HCR9 933 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 VPS13AQ96RL7 3174 aa24.05■■□□□ 1.44
MSH6-202ENST00000411819 ATF6P18850 670 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 AMPD3Q01432 767 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 TSPY1Q01534 308 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 SMARCB1Q12824 385 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms