RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 INO80BQ9C086 356 aaPredicted RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 DMGDHQ9UI17 866 aaKnown RBP8□□□□□ -1.13
CXCR4-202ENST00000409817 COG5Q9UP83 839 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 ZSWIM8A7E2V4 1837 aa8□□□□□ -1.13
CXCR4-202ENST00000409817 RRN3P2A6NIE6 340 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 KRIT1O00522 736 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 HEXIM1O94992 359 aaKnown RBP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 SNAI1O95863 264 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 ALDH1A1P00352 501 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 TNNC2P02585 160 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 ADH1AP07327 375 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 MCF2P10911 925 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 CTNNA2P26232 953 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 SLC1A1P43005 524 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 NSFP46459 744 aaKnown RBP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 DNA2P51530 1060 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 MBTD1Q05BQ5 628 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 PCBP1Q15365 356 aaKnown RBP eCLIP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 APBB1IPQ7Z5R6 666 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF410Q86VK4 478 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 DNAAF5Q86Y56 855 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 FAM71BQ8TC56 605 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 WHAMMQ8TF30 809 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 ANKRD36BP1Q96IX9 119 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 NLRP4Q96MN2 994 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 RUNDC3BQ96NL0 473 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 KRT12Q99456 494 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 ZSWIM1Q9BR11 485 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 TINF2Q9BSI4 451 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 C16orf70Q9BSU1 422 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 NUP85Q9BW27 656 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 NIF3L1Q9GZT8 377 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 RNPEPQ9H4A4 650 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 GOLPH3Q9H4A6 298 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 MRPL47Q9HD33 250 aaKnown RBP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 EHD2Q9NZN4 543 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 CNOT8Q9UFF9 292 aaKnown RBP7.99□□□□□ -1.13
CXCR4-202ENST00000409817 DCTN4Q9UJW0 460 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 PCDHB4Q9Y5E5 795 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 PTPRJQ12913 1337 aa7.99□□□□□ -1.13
CXCR4-202ENST00000409817 TNFRSF10BO14763 440 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 SART1O43290 800 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 CELF2O95319 508 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 LSM8O95777 96 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 TMEM191BP0C7N4 346 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 MAPK1P28482 360 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 GNA15P30679 374 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 CTNNA1P35221 906 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 TNNT3P45378 269 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 CLCN3P51790 818 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF132P52740 706 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 TRPC3Q13507 836 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ACVR2BQ13705 512 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 DGKDQ16760 1214 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ZBTB41Q5SVQ8 909 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 LIN9Q5TKA1 542 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 LMBRD2Q68DH5 695 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 NT5DC4Q86YG4 428 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 PHF13Q86YI8 300 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 EFCAB13Q8IY85 973 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 MCOLN2Q8IZK6 566 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 GOLGA6L1Q8N7Z2 621 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 UBR7Q8N806 425 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 RBBP8NLQ8NC74 664 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 OR5B17Q8NGF7 314 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 AFG1LQ8WV93 481 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 CD101Q93033 1021 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ITPKCQ96DU7 683 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 RNPC3Q96LT9 517 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ASB16Q96NS5 453 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF518BQ9C0D4 1074 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ASB7Q9H672 318 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 RPF1Q9H9Y2 349 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 IFT122Q9HBG6 1241 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 APOBEC3GQ9HC16 384 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 SMARCAL1Q9NZC9 954 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 SCINQ9Y6U3 715 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 MANSC4A6NHS7 340 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 FGGP02679 453 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 MMP3P08254 477 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 HARSP12081 509 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 COMTP21964 271 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 MPSTP25325 297 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 OAS2P29728 719 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ATICP31939 592 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 TNFSF9P41273 254 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ADCYAP1R1P41586 468 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 TAGLNQ01995 201 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 GUCY2DQ02846 1103 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 DHX34Q14147 1143 aaKnown RBP7.98□□□□□ -1.13
CXCR4-202ENST00000409817 FAM26DQ5JW98 314 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 COX20Q5RI15 118 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 SH3PXD2AQ5TCZ1 1133 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 SEL1L2Q5TEA6 688 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ZNF697Q5TEC3 545 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 ALS2CLQ60I27 953 aa7.98□□□□□ -1.13
CXCR4-202ENST00000409817 C16orf46Q6P387 395 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms