RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 VEPH1Q14D04 833 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 TMCO2Q7Z6W1 182 aaPredicted RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 BRSK2Q8IWQ3 736 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 MYRIPQ8NFW9 859 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 KCTD10Q9H3F6 313 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 KRT82Q9NSB4 513 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 FLRT1Q9NZU1 646 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 FAM8A1Q9UBU6 413 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 TSR3Q9UJK0 312 aaKnown RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 DIS3Q9Y2L1 958 aaKnown RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 MYO5AQ9Y4I1 1855 aaKnown RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 DPYSL4O14531 572 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 ITGBL1O95965 494 aaPredicted RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 ZBED1O96006 694 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 KRT10P13645 584 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 MUTP22033 750 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 C10orf120Q5SQS8 335 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 GPR161Q8N6U8 529 aaKnown RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 LRRN4Q8WUT4 740 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 ZNF606Q8WXB4 792 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 RFFLQ8WZ73 363 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 SEMA4DQ92854 862 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 FAM81BQ96LP2 452 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNX13-202ENST00000409604 MAFBQ9Y5Q3 323 aaPredicted RBP12.05□□□□□ -0.48
SNX13-202ENST00000409604 ALG6Q9Y672 507 aa12.05□□□□□ -0.48
SNX13-202ENST00000409604 NRAPQ86VF7 1730 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 KPNA7A9QM74 516 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 DFFAO00273 331 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 KPNA6O60684 536 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 TUBB4AP04350 444 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 PCSK1P29120 753 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 AP1B1Q10567 949 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 TSTA3Q13630 321 aaPredicted RBP12.04□□□□□ -0.48
SNX13-202ENST00000409604 WHAMMP3Q1A5X7 153 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 GANCQ8TET4 914 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 SENP8Q96LD8 212 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 OSBPL9Q96SU4 736 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 LPIN3Q9BQK8 851 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
SNX13-202ENST00000409604 DDIT4Q9NX09 232 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 NFU1Q9UMS0 254 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 RTN2O75298 545 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 ATP1A2P50993 1020 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 AP3M2P53677 418 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
SNX13-202ENST00000409604 GDF6Q6KF10 455 aaPredicted RBP12.04□□□□□ -0.48
SNX13-202ENST00000409604 ENOSF1Q7L5Y1 443 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 STKLD1Q8NE28 680 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 ABCF3Q9NUQ8 709 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 FAM105AQ9NUU6 356 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 CNTNAP2Q9UHC6 1331 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 KIAA0391O15091 583 aaKnown RBP12.04□□□□□ -0.48
SNX13-202ENST00000409604 KRT17Q04695 432 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 PTPN11Q06124 597 aaPredicted RBP12.04□□□□□ -0.48
SNX13-202ENST00000409604 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 ZNF792Q3KQV3 632 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 DCLK2Q8N568 766 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 HVCN1Q96D96 273 aa12.04□□□□□ -0.48
SNX13-202ENST00000409604 ATP8B3O60423 1300 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 MSCO60682 206 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 ACSL3O95573 720 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 CKMP06732 381 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 MCF2P10911 925 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 DARSP14868 501 aaKnown RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 CTNNA1P35221 906 aaKnown RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 IKBKEQ14164 716 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 GRB14Q14449 540 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 CEP85LQ5SZL2 805 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 CACUL1Q86Y37 369 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 COG1Q8WTW3 980 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 MED15Q96RN5 788 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 PARVAQ9NVD7 372 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 ASNSD1Q9NWL6 643 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 MROH7Q68CQ1 1323 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 TYW5A2RUC4 315 aaKnown RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 ARL13BQ3SXY8 428 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 WDR49Q8IV35 697 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 SKA2Q8WVK7 121 aaPredicted RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 NDRG1Q92597 394 aaKnown RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 LRRC45Q96CN5 670 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 TSNARE1Q96NA8 513 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 SMYD2Q9NRG4 433 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 IPPQ9Y573 584 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 M0QYT0 321 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 PODXLO00592 558 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 RPL17P18621 184 aaKnown RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 SLC39A12Q504Y0 691 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 ZNF618Q5T7W0 954 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 ATG4AQ8WYN0 398 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 FAM161BQ96MY7 647 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 KLHL8Q9P2G9 620 aaPredicted RBP12.03□□□□□ -0.48
SNX13-202ENST00000409604 MYH1P12882 1939 aa12.03□□□□□ -0.48
SNX13-202ENST00000409604 MIIPQ5JXC2 388 aa12.02□□□□□ -0.48
SNX13-202ENST00000409604 RNF187Q5TA31 235 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms