RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 F5H5T6 163 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 SMARCA1P28370 1054 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 CTNNA1P35221 906 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 DGKEP52429 567 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 RAB14P61106 215 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 TRAF7Q6Q0C0 670 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 TRIM63Q969Q1 353 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 PCDHAC2Q9Y5I4 1007 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 RTN3O95197 1032 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 S100A9P06702 114 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 MAN1A1P33908 653 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 THOC5Q13769 683 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 MTFR1Q15390 333 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 JADE1Q6IE81 842 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 KDELC2Q7Z4H8 507 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 TEX9Q8N6V9 391 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 KCTD6Q8NC69 237 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 MGARPQ8TDB4 240 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 FOPNLQ96NB1 174 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 C1QTNF1Q9BXJ1 281 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 ARHGAP39Q9C0H5 1083 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 TBC1D23Q9NUY8 699 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 TEKT2Q9UIF3 430 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 ITGB1BP2Q9UKP3 347 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 ST3GAL5Q9UNP4 418 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 POTEFA5A3E0 1075 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 NPM3O75607 178 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 EYA4O95677 639 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 RALBP11234 206 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 DHX9Q08211 1270 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 C6orf118Q5T5N4 469 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 THEMIS2Q5TEJ8 643 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 PDE12Q6L8Q7 609 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 PPP4R4Q6NUP7 873 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 POTEGQ6S5H5 508 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 POTEEQ6S8J3 1075 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 PPTC7Q8NI37 304 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 SETD7Q8WTS6 366 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 RMDN1Q96DB5 314 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 FAM210AQ96ND0 272 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 MRPL47Q9HD33 250 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 NLRC4Q9NPP4 1024 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 TRMT13Q9NUP7 481 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 DNTTP04053 509 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 FSHRP23945 695 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 IQCB1Q15051 598 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 CYP26C1Q6V0L0 522 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 TUBGCP3Q96CW5 907 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 SH2D3AQ9BRG2 576 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 RAB17Q9H0T7 212 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 NSUN3Q9H649 340 aaKnown RBP7.67□□□□□ -1.18
SCN9A-202ENST00000409435 PLEKHA5Q9HAU0 1116 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 IMPACTQ9P2X3 320 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 CD207Q9UJ71 328 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 UBE4BO95155 1302 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 UMODL1Q5DID0 1318 aa7.67□□□□□ -1.18
SCN9A-202ENST00000409435 ASS1P00966 412 aaKnown RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SMPD1P17405 629 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 HSD17B4P51659 736 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 MYLK4Q86YV6 388 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 CHPFQ8IZ52 775 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 DNAAF3Q8N9W5 541 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 TTC8Q8TAM2 541 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SLC7A14Q8TBB6 771 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 USP33Q8TEY7 942 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PPP1R13LQ8WUF5 828 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 STAMBPL1Q96FJ0 436 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PPP1R16AQ96I34 528 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 GINS4Q9BRT9 223 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 TLR9Q9NR96 1032 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 MAD1L1Q9Y6D9 718 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 EFCAB8A8MWE9 144 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 TDP2O95551 362 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SDC4P31431 198 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 CFAP221Q4G0U5 840 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 CYB5R4Q7L1T6 521 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 MLKLQ8NB16 471 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PGLYRP2Q96PD5 576 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 FSD1LQ9BXM9 530 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 KRT82Q9NSB4 513 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 WBP1LQ9NX94 342 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 RGL1Q9NZL6 768 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 C10orf71Q711Q0 1435 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 FAM170AA1A519 330 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PHF20L1A8MW92 1017 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 TRIM16O95361 564 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 NFATC1O95644 943 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 KRT14P02533 472 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SPATA31D3P0C874 917 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PTPN2P17706 415 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PLCG1P19174 1290 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 ATP1A2P50993 1020 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 IRX5P78411 483 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SF3A3Q12874 501 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 ELOAQ14241 798 aaKnown RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PLCL1Q15111 1095 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SPATA31D4Q6ZUB0 917 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 ZC3H18Q86VM9 953 aaKnown RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SFR1Q86XK3 245 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 CACUL1Q86Y37 369 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms