RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 UBE3BQ7Z3V4 1068 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 RASAL3Q86YV0 1011 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 TSPYL6Q8N831 410 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 ENGASEQ8NFI3 743 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 KCNG4Q8TDN1 519 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 CCDC51Q96ER9 411 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 DTNBP1Q96EV8 351 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 ZNF333Q96JL9 665 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 ANKRD27Q96NW4 1050 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 PANX2Q96RD6 677 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 PNKPQ96T60 521 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 MEIS3Q99687 375 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 YIPF4Q9BSR8 244 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 MOV10L1Q9BXT6 1211 aaKnown RBP5.96□□□□□ -1.46
CLK1-202ENST00000409403 ZMAT4Q9H898 229 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 KAT14Q9H8E8 782 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 IRAK4Q9NWZ3 460 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 CHPF2Q9P2E5 772 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 BDP1A6H8Y1 2624 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 NCOR1O75376 2440 aa5.96□□□□□ -1.46
CLK1-202ENST00000409403 ERICH2A1L162 156 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 LRRIQ3A6PVS8 624 aaPredicted RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 FOXP2O15409 715 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 PPFIA2O75334 1257 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 CD40P25942 277 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 PDE6BP35913 854 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 MAGEA8P43361 318 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 CCNHP51946 323 aaPredicted RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 INHBEP58166 350 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 HERVK_113P62684 666 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 ATP8B2P98198 1209 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 KLF1Q13351 362 aaPredicted RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 NFIXQ14938 502 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 PAN2Q504Q3 1202 aaKnown RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 HSP90AB2PQ58FF8 381 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 CATSPEREQ5SY80 951 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 ALS2CLQ60I27 953 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 SPECC1LQ69YQ0 1117 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 ADALQ6DHV7 355 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 ESRP1Q6NXG1 681 aaKnown RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 ZC3H14Q6PJT7 736 aaKnown RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 CRELD2Q6UXH1 353 aaPredicted RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 CCDC121Q6ZUS5 278 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 CBLL1Q75N03 491 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 CEP57Q86XR8 500 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 CBARPQ8N350 705 aaPredicted RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 MIPOL1Q8TD10 442 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 SH3GL2Q99962 352 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 LRFN3Q9BTN0 628 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 EPC1Q9H2F5 836 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 GBA2Q9HCG7 927 aaPredicted RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 CD248Q9HCU0 757 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 C14orf119Q9NWQ9 140 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 KLHL14Q9P2G3 628 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 HOOK1Q9UJC3 728 aaKnown RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 PTPN22Q9Y2R2 807 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 NOC2LQ9Y3T9 749 aaKnown RBP5.95□□□□□ -1.46
CLK1-202ENST00000409403 CD163L1Q9NR16 1453 aa5.95□□□□□ -1.46
CLK1-202ENST00000409403 ACOT7O00154 380 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 ABLIM1O14639 778 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 SASH1O94885 1247 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 FESP07332 822 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 ME1P48163 572 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 USP14P54578 494 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 TBX2Q13207 712 aaPredicted RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 EPHA7Q15375 998 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 LRIT3Q3SXY7 679 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CAPRIN2Q6IMN6 1127 aaKnown RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 TLDC1Q6P9B6 456 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 ANKRD23Q86SG2 305 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 ZBTB46Q86UZ6 589 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 NME9Q86XW9 330 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 IRF2BP1Q8IU81 584 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 TMEM139Q8IV31 216 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 RAVER1Q8IY67 606 aaKnown RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 CCDC13Q8IYE1 715 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 OR8K1Q8NGG5 319 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 SPDL1Q96EA4 605 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 C16orf92Q96LL3 132 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CCDC114Q96M63 670 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CLIC6Q96NY7 704 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 ZDHHC5Q9C0B5 715 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 SLC40A1Q9NP59 571 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 TOPORSQ9NS56 1045 aaPredicted RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 DTLQ9NZJ0 730 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 PUF60Q9UHX1 559 aaKnown RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 TPCN1Q9ULQ1 816 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 HCFC2Q9Y5Z7 792 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 GRIN2DO15399 1336 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 TNKSO95271 1327 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 PCDH11XQ9BZA7 1347 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 PCDH11YQ9BZA8 1340 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 GOLGA6L10A0A0M3HER8 536 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 MYO1FO00160 1098 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 BIN1O00499 593 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 MAFGO15525 162 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 HSF2BPO75031 334 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CDKL5O76039 1030 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 YEATS4O95619 227 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 SERPINB2P05120 415 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms