RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 BBS5Q8N3I7 341 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 PRELID2Q8N945 189 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 FNDC8Q8TC99 324 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 GAB3Q8WWW8 586 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 MAML1Q92585 1016 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 GLG1Q92896 1179 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 MPP4Q96JB8 637 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 ZFRQ96KR1 1074 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 TRIM31Q9BZY9 425 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 CHMP2BQ9UQN3 213 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 CYP2D7A0A087X1C5 515 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 CCDC194A0A1B0GVG4 234 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 ARHGAP10A1A4S6 786 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SMIM23A6NLE4 172 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 PEX1O43933 1283 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 ZBED4O75132 1171 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 HLA-DOAP06340 250 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 OR52Z1P0C646 297 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 CDK4P11802 303 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 ANPEPP15144 967 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SERPINB3P29508 390 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 GTF2H1P32780 548 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SHMT1P34896 483 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 CCNFP41002 786 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 JAM2P57087 298 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 AP2B1P63010 937 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 GSTM4Q03013 218 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 MTMR2Q13614 643 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 TAF1BQ53T94 588 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 DHRS4L2Q6PKH6 230 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 NLRP9Q7RTR0 991 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 FRMD5Q7Z6J6 570 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SCUBE1Q8IWY4 988 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 RHOT2Q8IXI1 618 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 ANKRD42Q8N9B4 389 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SLC44A5Q8NCS7 719 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 ZNF280CQ8ND82 737 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 MGARPQ8TDB4 240 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 DQX1Q8TE96 717 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SPIRE2Q8WWL2 714 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 PRICKLE1Q96MT3 831 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 HNRNPABQ99729 332 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 LRRC19Q9H756 370 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 SERPINB13Q9UIV8 391 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 MTUS1Q9ULD2 1270 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 PADI4Q9UM07 663 aa11.22□□□□□ -0.61
NIF3L1-204ENST00000409357 TMEM247A6NEH6 219 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 USP17L5A8MUK1 530 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 GYG2O15488 501 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 GH2P01242 217 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 UBTFL6P0CB48 400 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 UCHL3P15374 230 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 CYP11B2P19099 503 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 FGFR4P22455 802 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 VARSP26640 1264 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 COILP38432 576 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 IRX4P78413 519 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 GABPAQ06546 454 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 MED21Q13503 144 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 PKN2Q16513 984 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 LONRF1Q17RB8 773 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 USP41Q3LFD5 358 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 SYCP2LQ5T4T6 812 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 C6orf163Q5TEZ5 329 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 FYB2Q5VWT5 728 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 TATDN1Q6P1N9 297 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 RFWD3Q6PCD5 774 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 KYAT3Q6YP21 454 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 MAP7D3Q8IWC1 876 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 ALLCQ8N6M5 410 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 UBL4BQ8N7F7 174 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 BBOF1Q8ND07 529 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 DYNLL2Q96FJ2 89 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 VPS50Q96JG6 964 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 ERVK-5Q9HDB9 667 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 AAASQ9NRG9 546 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 RHBDL2Q9NX52 303 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 UTP6Q9NYH9 597 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 PTPN22Q9Y2R2 807 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 TELO2Q9Y4R8 837 aa11.21□□□□□ -0.61
NIF3L1-204ENST00000409357 CEP290O15078 2479 aa11.21□□□□□ -0.62
NIF3L1-204ENST00000409357 MYMKA6NI61 221 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 VILLO15195 856 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 EXOC3O60645 756 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PEX10O60683 326 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 MTA2O94776 668 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 CBX6O95503 412 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 GH1P01241 217 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 ASNSP08243 561 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 RARBP10826 455 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms