RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 FAM228BP0C875 321 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 CHRNB2P17787 502 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 CYLC1P35663 651 aaPredicted RBP17.96■□□□□ 0.47
SSB-202ENST00000409333 NDST1P52848 882 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 RAD23BP54727 409 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 DSTYKQ6XUX3 929 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 TNS4Q8IZW8 715 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 PDCL2Q8N4E4 241 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 LNX1Q8TBB1 728 aaPredicted RBP17.96■□□□□ 0.47
SSB-202ENST00000409333 KIAA1524Q8TCG1 905 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 RSPH1Q8WYR4 309 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 DDX1Q92499 740 aaKnown RBP17.96■□□□□ 0.47
SSB-202ENST00000409333 AGPAT1Q99943 283 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.96■□□□□ 0.47
SSB-202ENST00000409333 NRP1O14786 923 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 TACC1O75410 805 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 PBX3P40426 434 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 SLC11A1P49279 550 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 WSCD1Q658N2 575 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 ZSCAN30Q86W11 494 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 OSTM1Q86WC4 334 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 PALB2Q86YC2 1186 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 GLYCTKQ8IVS8 523 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 SLC4A11Q8NBS3 891 aa17.96■□□□□ 0.47
SSB-202ENST00000409333 FAM124BQ9H5Z6 455 aaPredicted RBP17.96■□□□□ 0.47
SSB-202ENST00000409333 REXO2Q9Y3B8 237 aaKnown RBP17.96■□□□□ 0.47
SSB-202ENST00000409333 TIMM13Q9Y5L4 95 aaPredicted RBP17.96■□□□□ 0.47
SSB-202ENST00000409333 PTPRDP23468 1912 aa17.96■□□□□ 0.46
SSB-202ENST00000409333 EIF3CLB5ME19 914 aaKnown RBP17.95■□□□□ 0.46
SSB-202ENST00000409333 TMEM189-UBE2V1I3L0A0 370 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 DDX3XO00571 662 aaKnown RBP eCLIP17.95■□□□□ 0.465e-26■■■□□ 14.7
SSB-202ENST00000409333 MMEP08473 750 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 FMO1Q01740 532 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 CYP27A1Q02318 531 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 SLC18A3Q16572 532 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 DPH6Q7L8W6 267 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 OR6B3Q8NGW1 331 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 EIF3CQ99613 913 aaKnown RBP17.95■□□□□ 0.46
SSB-202ENST00000409333 LBHD1Q9BQE6 289 aaPredicted RBP17.95■□□□□ 0.46
SSB-202ENST00000409333 ZSWIM1Q9BR11 485 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 CWH43Q9H720 699 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 MARCH5Q9NX47 278 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 PUF60Q9UHX1 559 aaKnown RBP17.95■□□□□ 0.46
SSB-202ENST00000409333 ADGRG1Q9Y653 693 aa17.95■□□□□ 0.46
SSB-202ENST00000409333 THAP12O43422 761 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 BRD2P25440 801 aaKnown RBP17.94■□□□□ 0.46
SSB-202ENST00000409333 LMO2P25791 158 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 SSTR3P32745 418 aaPredicted RBP17.94■□□□□ 0.46
SSB-202ENST00000409333 BPIFB4P59827 614 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 CDR2Q01850 454 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 BMS1Q14692 1282 aaKnown RBP17.94■□□□□ 0.46
SSB-202ENST00000409333 TTC39CQ8N584 583 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 SLC30A5Q8TAD4 765 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 TFAP2BQ92481 460 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 TMEM176AQ96HP8 235 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 SEPT11Q9NVA2 429 aaKnown RBP17.94■□□□□ 0.46
SSB-202ENST00000409333 A0A0U1RQJ8 604 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 FAM170AA1A519 330 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 USP27XA6NNY8 438 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 NT5C1B-RDH14C9J2C7 533 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 M0QZQ0 153 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 LCA5LO95447 670 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 GALTP07902 379 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 CFHP08603 1231 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 ODC1P11926 461 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 TNFAIP3P21580 790 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 WARSP23381 471 aaKnown RBP17.94■□□□□ 0.46
SSB-202ENST00000409333 BCAR1P56945 870 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 VPS36Q86VN1 386 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 TMEM173Q86WV6 379 aaPredicted RBP17.94■□□□□ 0.46
SSB-202ENST00000409333 ATRIPQ8WXE1 791 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 SUSD3Q96L08 255 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 PCDHB18PQ96TA0 734 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 TMEM175Q9BSA9 504 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 NT5C1AQ9BXI3 368 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 SNX25Q9H3E2 840 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 DPEP3Q9H4B8 488 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 FAN1Q9Y2M0 1017 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 PPP2R2CQ9Y2T4 447 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 PLXNA4Q9HCM2 1894 aa17.94■□□□□ 0.46
SSB-202ENST00000409333 A8MXQ7 604 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 ALDH2P05091 517 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 PAEPP09466 180 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 CD19P15391 556 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 GNL1P36915 607 aaPredicted RBP17.93■□□□□ 0.46
SSB-202ENST00000409333 SMYD5Q6GMV2 418 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 DNAAF5Q86Y56 855 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 TMEM86AQ8N2M4 240 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 ZNF606Q8WXB4 792 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 TRMT1Q9NXH9 659 aaKnown RBP17.93■□□□□ 0.46
SSB-202ENST00000409333 ADAM28Q9UKQ2 775 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 NENFQ9UMX5 172 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 TFR2Q9UP52 801 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 STXBP5LQ9Y2K9 1186 aa17.93■□□□□ 0.46
SSB-202ENST00000409333 GABRDO14764 452 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 GJB5O95377 273 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 PDGFRBP09619 1106 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 CCDC175P0C221 793 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms