RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 TYRO3Q06418 890 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 AAK1Q2M2I8 961 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 CBWD6Q4V339 395 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 ZNF667Q5HYK9 610 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 CBWD3Q5JTY5 395 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 CBWD5Q5RIA9 395 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 SYCE2Q6PIF2 218 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 C11orf57Q6ZUT1 292 aaPredicted RBP21.77■■□□□ 1.08
PTCD3-202ENST00000409326 SMRP1Q8NCR6 262 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 KREMEN2Q8NCW0 462 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 FBXL13Q8NEE6 735 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 OR10T2Q8NGX3 314 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 ZNF461Q8TAF7 563 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 MMS19Q96T76 1030 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 IMPG2Q9BZV3 1241 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 THAP9Q9H5L6 903 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 SFXN1Q9H9B4 322 aa21.77■■□□□ 1.08
PTCD3-202ENST00000409326 NXF1Q9UBU9 619 aaKnown RBP21.77■■□□□ 1.08
PTCD3-202ENST00000409326 GABRDO14764 452 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 CLSTN1O94985 981 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 LETM1O95202 739 aaPredicted RBP21.76■■□□□ 1.07
PTCD3-202ENST00000409326 SPATA31D3P0C874 917 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 CPB1P15086 417 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 LHX1P48742 406 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 CLUL1Q15846 466 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 TPGS2Q68CL5 300 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 SPATA31D4Q6ZUB0 917 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 OSTM1Q86WC4 334 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 IRF2BP1Q8IU81 584 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.76■■□□□ 1.07
PTCD3-202ENST00000409326 ENOX1Q8TC92 643 aaKnown RBP21.76■■□□□ 1.07
PTCD3-202ENST00000409326 KBTBD7Q8WVZ9 684 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 DDX43Q9NXZ2 648 aaKnown RBP21.76■■□□□ 1.07
PTCD3-202ENST00000409326 POLIQ9UNA4 740 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 COQ4Q9Y3A0 265 aa21.76■■□□□ 1.07
PTCD3-202ENST00000409326 SPDYE4A6NLX3 237 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 PMM2O15305 246 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 N4BP1O75113 896 aaKnown RBP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 TACC1O75410 805 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 FAM163BP0C2L3 166 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 OR4Q2P0C623 313 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 P4HA1P13674 534 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 ATF2P15336 505 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 WARSP23381 471 aaKnown RBP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 FMO5P49326 533 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 NOP14P78316 857 aaKnown RBP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 MRPS5P82675 430 aaKnown RBP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 MYL7Q01449 175 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 SMAD4Q13485 552 aaKnown RBP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 LIN9Q5TKA1 542 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 FAM114A1Q8IWE2 563 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 TMEM209Q96SK2 561 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 PI4K2AQ9BTU6 479 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 ZCWPW1Q9H0M4 648 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 DNAJC25Q9H1X3 360 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 S1PR5Q9H228 398 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 RAB20Q9NX57 234 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 AFF4Q9UHB7 1163 aaKnown RBP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.75■■□□□ 1.07
PTCD3-202ENST00000409326 C5orf42Q9H799 3197 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 DENND4AQ7Z401 1863 aa21.75■■□□□ 1.07
PTCD3-202ENST00000409326 PTPRDP23468 1912 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 TCF20Q9UGU0 1960 aaKnown RBP21.74■■□□□ 1.07
PTCD3-202ENST00000409326 GPR17Q13304 367 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 NFKBIBQ15653 356 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 PUS10Q3MIT2 529 aaKnown RBP21.74■■□□□ 1.07
PTCD3-202ENST00000409326 SPOPLQ6IQ16 392 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 CCDC150Q8NCX0 1101 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 CMASQ8NFW8 434 aaPredicted RBP21.74■■□□□ 1.07
PTCD3-202ENST00000409326 SEMA4DQ92854 862 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 ELMO3Q96BJ8 720 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 ACBD6Q9BR61 282 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 MRPL45Q9BRJ2 306 aaKnown RBP21.74■■□□□ 1.07
PTCD3-202ENST00000409326 SMYD3Q9H7B4 428 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 ZDHHC7Q9NXF8 308 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 MAFFQ9ULX9 164 aa21.74■■□□□ 1.07
PTCD3-202ENST00000409326 P4HA2O15460 535 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 MBTPS2O43462 519 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 ZMYND10O75800 440 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 PAPLNO95428 1278 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 C8AP07357 584 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 PCSK1P29120 753 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 TSPY1Q01534 308 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 ITIH3Q06033 890 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 KCNH2Q12809 1159 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 UVSSAQ2YD98 709 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 RARS2Q5T160 578 aaKnown RBP21.73■■□□□ 1.07
PTCD3-202ENST00000409326 RNF19BQ6ZMZ0 732 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 CCDC149Q6ZUS6 474 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 RTL10Q7L3V2 364 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 C12orf76Q8N812 135 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-202ENST00000409326 FUCA2Q9BTY2 467 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 APOL5Q9BWW9 433 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 ADAM7Q9H2U9 754 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 APOBEC3GQ9HC16 384 aaKnown RBP21.73■■□□□ 1.07
PTCD3-202ENST00000409326 NFE2L3Q9Y4A8 694 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 DOCK6Q96HP0 2047 aa21.73■■□□□ 1.07
PTCD3-202ENST00000409326 SYCE3A1L190 88 aa21.72■■□□□ 1.07
PTCD3-202ENST00000409326 LRRN2O75325 713 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms