RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 BBS5Q8N3I7 341 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 EXT2Q93063 718 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 OXNAD1Q96HP4 312 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-202ENST00000409031 TIPINQ9BVW5 301 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 KIAA1683Q9H0B3 1180 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 UNC45AQ9H3U1 944 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 RPF1Q9H9Y2 349 aaKnown RBP18.47■□□□□ 0.55
SMPD4-202ENST00000409031 TMCO1Q9UM00 188 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 SIK3Q9Y2K2 1263 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 AFF2P51816 1311 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 TBC1D4O60343 1298 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 SORBS3O60504 671 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 ENTPD5O75356 428 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 SRGAP2CP0DJJ0 459 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 OR9Q1Q8NGQ5 310 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 RNF217Q8TC41 542 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 NSUN4Q96CB9 384 aaKnown RBP18.47■□□□□ 0.55
SMPD4-202ENST00000409031 OSBPL7Q9BZF2 842 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 CHORDC1Q9UHD1 332 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-202ENST00000409031 CEMIPQ8WUJ3 1361 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 GFAPP14136 432 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 SPRP35270 261 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-202ENST00000409031 AP3M2P53677 418 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 SESN2P58004 480 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-202ENST00000409031 ARL13BQ3SXY8 428 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 KIAA0895Q8NCT3 520 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 CNDP1Q96KN2 507 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 PNMA3Q9UL41 463 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 KIAA1210Q9ULL0 1709 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 FLT1P17948 1338 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 STIP1P31948 543 aaKnown RBP18.46■□□□□ 0.55
SMPD4-202ENST00000409031 FAM102AQ5T9C2 384 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-202ENST00000409031 HACE1Q8IYU2 909 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 INPP4AQ96PE3 977 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-202ENST00000409031 FRMD8P1Q9BZ68 369 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-202ENST00000409031 PIK3CDO00329 1044 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 CDK16Q00536 496 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 LBRQ14739 615 aaKnown RBP18.46■□□□□ 0.55
SMPD4-202ENST00000409031 TMTC4Q5T4D3 741 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 C4orf22Q6V702 233 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 PPP1R36Q96LQ0 422 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 LRMDAQ9H2I8 198 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 DNM1LO00429 736 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 YY1P25490 414 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 PMLP29590 882 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 ZBTB41Q5SVQ8 909 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 FEZF2Q8TBJ5 459 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 SPATA18Q8TC71 538 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 APBB2Q92870 758 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 NINJ2Q9NZG7 142 aa18.46■□□□□ 0.55
SMPD4-202ENST00000409031 KIAA0391O15091 583 aaKnown RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 ALBP02768 609 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 BGNP21810 368 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 KRT76Q01546 638 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 AASDHQ4L235 1098 aaPredicted RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 MROH9Q5TGP6 573 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 CACYBPQ9HB71 228 aaKnown RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 GLRA3O75311 464 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 SNRPFP62306 86 aaKnown RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 FBXO36Q8NEA4 188 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 PIGBQ92521 554 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 RPL5P46777 297 aaKnown RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 EIF2B2P49770 351 aaKnown RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 KRR1Q13601 381 aaKnown RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 PKN1Q16512 942 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 RSAD1Q9HA92 442 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 GIMAP4Q9NUV9 329 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 KPNA4O00629 521 aaPredicted RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 SHBGP04278 402 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 OCM2P0CE71 109 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 OCMP0CE72 109 aaPredicted RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 RPS6KA3P51812 740 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 SNAP25P60880 206 aa18.45■□□□□ 0.54
SMPD4-202ENST00000409031 ILKAPQ9H0C8 392 aaPredicted RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 COL3A1P02461 1466 aaPredicted RBP18.45■□□□□ 0.54
SMPD4-202ENST00000409031 GRK2P25098 689 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 INAQ16352 499 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SNRNP35Q16560 246 aaKnown RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 ITPRIPL1Q6GPH6 555 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 FAM84BQ96KN1 310 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 TMEM8AQ9HCN3 771 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SFNP31947 248 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 MTMR1Q13613 665 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 ZC2HC1CQ53FD0 456 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SLC26A11Q86WA9 606 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 ATAD3AQ9NVI7 634 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SYBUQ9NX95 663 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 CEP152O94986 1710 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 DGKIO75912 1065 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 FESP07332 822 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 CDH2P19022 906 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-202ENST00000409031 CCND2P30279 289 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 CHN2P52757 468 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 MAP3K10Q02779 954 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 PDIA6Q15084 440 aa18.44■□□□□ 0.54
SMPD4-202ENST00000409031 SEC23AQ15436 765 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms