RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 M0QZQ0 153 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 ODC1P11926 461 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 ATP2A2P16615 1042 aaKnown RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 HTRA4P83105 476 aaPredicted RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 MAPK8IP2Q13387 824 aaPredicted RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 RASIP1Q5U651 963 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 HERC6Q8IVU3 1022 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 OR6B3Q8NGW1 331 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 SLC20A1Q8WUM9 679 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 CCDC42Q96M95 316 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 ZBED2Q9BTP6 218 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 ELOVL4Q9GZR5 314 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 DEF6Q9H4E7 631 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 NME7Q9Y5B8 376 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 MRPL42Q9Y6G3 142 aaKnown RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 NT5C1B-RDH14C9J2C7 533 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 TADA2AO75478 443 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 WARSP23381 471 aaKnown RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 GNA15P30679 374 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 RAD23BP54727 409 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 BPIFB4P59827 614 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 C9orf50Q5SZB4 431 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 SPOUT1Q5T280 376 aaKnown RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 TMEM173Q86WV6 379 aaPredicted RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 PHOSPHO2Q8TCD6 241 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 SYT11Q9BT88 431 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 COLEC11Q9BWP8 271 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 PYCARDQ9ULZ3 195 aa21.84■■□□□ 1.09
CHKB-201ENST00000406938 TIMM13Q9Y5L4 95 aaPredicted RBP21.84■■□□□ 1.09
CHKB-201ENST00000406938 ALDH7A1P49419 539 aaKnown RBP21.83■■□□□ 1.08
CHKB-201ENST00000406938 KIF11P52732 1056 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 ASTE1Q2TB18 679 aaPredicted RBP21.83■■□□□ 1.08
CHKB-201ENST00000406938 UNC93AQ86WB7 457 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 OSTM1Q86WC4 334 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 CCDC170Q8IYT3 715 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 TMEM86AQ8N2M4 240 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 SLC4A11Q8NBS3 891 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 OLIG1Q8TAK6 271 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 BCL7CQ8WUZ0 217 aaPredicted RBP21.83■■□□□ 1.08
CHKB-201ENST00000406938 TMEM176AQ96HP8 235 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 NT5C1AQ9BXI3 368 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 SNX25Q9H3E2 840 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 TSC2P49815 1807 aa21.83■■□□□ 1.08
CHKB-201ENST00000406938 A8MXQ7 604 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 HCRTO43612 131 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 CYP11A1P05108 521 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 PAEPP09466 180 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 TAF3Q5VWG9 929 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 DDX1Q92499 740 aaKnown RBP21.82■■□□□ 1.08
CHKB-201ENST00000406938 SPTLC3Q9NUV7 552 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 PUF60Q9UHX1 559 aaKnown RBP21.82■■□□□ 1.08
CHKB-201ENST00000406938 PCDHB8Q9UN66 801 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 STXBP5LQ9Y2K9 1186 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 INSL6Q9Y581 213 aa21.82■■□□□ 1.08
CHKB-201ENST00000406938 ARHGEF37A1IGU5 675 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 GABRDO14764 452 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 TRAPPC3O43617 180 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 AKR1B10O60218 316 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 FAM163BP0C2L3 166 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 LAG3P18627 525 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 LMO2P25791 158 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 CYLC1P35663 651 aaPredicted RBP21.81■■□□□ 1.08
CHKB-201ENST00000406938 GNL1P36915 607 aaPredicted RBP21.81■■□□□ 1.08
CHKB-201ENST00000406938 KCNT2Q6UVM3 1135 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 TOGARAM2Q6ZUX3 1019 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 GLYCTKQ8IVS8 523 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 AGPAT1Q99943 283 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHKB-201ENST00000406938 DPEP3Q9H4B8 488 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 ADAMTS1Q9UHI8 967 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 DSEQ9UL01 958 aa21.81■■□□□ 1.08
CHKB-201ENST00000406938 SF3B1O75533 1304 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHKB-201ENST00000406938 THAP12O43422 761 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 NDUFA10O95299 355 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 MMEP08473 750 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 CD19P15391 556 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 BRD2P25440 801 aaKnown RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 ANXA13P27216 316 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 CDR2Q01850 454 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 FUT10Q6P4F1 479 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 VPS36Q86VN1 386 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 LNX1Q8TBB1 728 aaPredicted RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 RNPC3Q96LT9 517 aaKnown RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 ZNF558Q96NG5 402 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 RAD9AQ99638 391 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 DESI2Q9BSY9 194 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 GPR62Q9BZJ7 368 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 EPN1Q9Y6I3 576 aaPredicted RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 A0A087X0T9 212 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 TLL1O43897 1013 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 PDGFRBP09619 1106 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 FAM228BP0C875 321 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 CHRNB2P17787 502 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 TYMPP19971 482 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 TKTP29401 623 aaKnown RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 LHX1P48742 406 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 FMO1Q01740 532 aa21.8■■□□□ 1.08
CHKB-201ENST00000406938 GFPT1Q06210 699 aaPredicted RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 BMS1Q14692 1282 aaKnown RBP21.8■■□□□ 1.08
CHKB-201ENST00000406938 SHHQ15465 462 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms