RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 NOTUMQ6P988 496 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 WDTC1Q8N5D0 677 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 RUFY1Q96T51 708 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 DPH5Q9H2P9 285 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 PLEKHA5Q9HAU0 1116 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 AGPSO00116 658 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 PSTPIP1O43586 416 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 MAN1A1P33908 653 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 RHOT1Q8IXI2 618 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 DNAJB3Q8WWF6 145 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 C18orf8Q96DM3 657 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 RUNDC3BQ96NL0 473 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 ERP44Q9BS26 406 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 KATNAL1Q9BW62 490 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 LHX5Q9H2C1 402 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 LCMT1Q9UIC8 334 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 USTQ9Y2C2 406 aa26.17■■□□□ 1.78
DNMT3A-206ENST00000406659 TCRBV7S2A1N4TA0A589 114 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 FSCN2O14926 492 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 GJB6O95452 261 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 RARAP10276 462 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 ECHS1P30084 290 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 SSR1P43307 286 aaKnown RBP26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 YARSP54577 528 aaKnown RBP26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 SREBF2Q12772 1141 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 CYP1B1Q16678 543 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 JAMLQ86YT9 394 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 ZDHHC14Q8IZN3 488 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 SLC4A11Q8NBS3 891 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 MAIP1Q8WWC4 291 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 DDX27Q96GQ7 796 aaKnown RBP26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 SNTG2Q9NY99 539 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 PCYOX1Q9UHG3 505 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 DERAQ9Y315 318 aa26.16■■□□□ 1.78
DNMT3A-206ENST00000406659 CITO14578 2027 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 TMEM191CA6NGB0 347 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 OPA1O60313 960 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 RNF40O75150 1001 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 CILPO75339 1184 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 STAU1O95793 577 aaKnown RBP26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 ADAM17P78536 824 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 TAP1Q03518 808 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 CRHR2Q13324 411 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 HIC1Q14526 733 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 CFAP58Q5T655 872 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 DCUN1D2Q6PH85 259 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 TMEM176AQ96HP8 235 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 TRIM31Q9BZY9 425 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 PTGIRP43119 386 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 GYS2P54840 703 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 PTPN11Q06124 597 aaPredicted RBP26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 FSCN1Q16658 493 aaKnown RBP26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 DUPD1Q68J44 220 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 CCDC137Q6PK04 289 aaKnown RBP26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 GOLGA6L1Q8N7Z2 621 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 EIF2AQ9BY44 585 aaKnown RBP26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 ELOVL4Q9GZR5 314 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 STRIP2Q9ULQ0 834 aa26.15■■□□□ 1.78
DNMT3A-206ENST00000406659 C17orf102A2RUQ5 167 aa26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 TREHO43280 583 aa26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 AXLP30530 894 aa26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 COILP38432 576 aaPredicted RBP26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 HSPA9P38646 679 aaKnown RBP26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 RPL7AP62424 266 aaKnown RBP26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 MYO1EQ12965 1108 aa26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 ORC1Q13415 861 aa26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 SIX1Q15475 284 aaPredicted RBP26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 TTC39CQ8N584 583 aa26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 RIN2Q8WYP3 895 aaPredicted RBP26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 TRIM6Q9C030 488 aaPredicted RBP26.14■■□□□ 1.78
DNMT3A-206ENST00000406659 TCRBV5S1A1TA0A578 114 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 GNAT1P11488 350 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 TAS2R40P59535 323 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 ZNF200P98182 395 aaPredicted RBP26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 DAB2IPQ5VWQ8 1189 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 TTC27Q6P3X3 843 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 CCDC105Q8IYK2 499 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 LRRC45Q96CN5 670 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 SNX27Q96L92 541 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 MCEEQ96PE7 176 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 TWNKQ96RR1 684 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 NEUROG2Q9H2A3 272 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 HMGXB4Q9UGU5 601 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 ADAM21Q9UKJ8 722 aa26.13■■□□□ 1.77
DNMT3A-206ENST00000406659 PODXLO00592 558 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 IGHA2P01877 340 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 AKR1A1P14550 325 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 LLGL1Q15334 1064 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 KCTD19Q17RG1 926 aaPredicted RBP26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 CYP4A22Q5TCH4 519 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 CCDC50Q8IVM0 306 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 KATNAL2Q8IYT4 538 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 C12orf50Q8NA57 414 aaPredicted RBP26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 C3orf20Q8ND61 904 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 HEXIM2Q96MH2 286 aaKnown RBP26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 FAM124BQ9H5Z6 455 aaPredicted RBP26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 BARX2Q9UMQ3 279 aaPredicted RBP26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 FAM155AB1AL88 458 aaPredicted RBP26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 VDRP11473 427 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 FNTAP49354 379 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms