RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 TDRPQ86YL5 185 aa16.39■□□□□ 0.21
ATG4B-205ENST00000404914 KCNK13Q9HB14 408 aa16.39■□□□□ 0.21
ATG4B-205ENST00000404914 TAS2R1Q9NYW7 299 aa16.39■□□□□ 0.21
ATG4B-205ENST00000404914 SMG5Q9UPR3 1016 aaKnown RBP16.39■□□□□ 0.21
ATG4B-205ENST00000404914 CLUHO75153 1309 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 SSTR1P30872 391 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 DSG3P32926 999 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 SNRNP35Q16560 246 aaKnown RBP16.38■□□□□ 0.21
ATG4B-205ENST00000404914 CCDC174Q6PII3 467 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 TCP10LQ8TDR4 215 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 SH3TC2Q8TF17 1288 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 ACCSQ96QU6 501 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 C11orf70Q9BRQ4 267 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 WDR83Q9BRX9 315 aaKnown RBP16.38■□□□□ 0.21
ATG4B-205ENST00000404914 ARMCX1Q9P291 453 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 PROSCO94903 275 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 TJP3O95049 919 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 MYBPC2Q14324 1141 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 B3GNT9Q6UX72 402 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 SAR1AQ9NR31 198 aa16.38■□□□□ 0.21
ATG4B-205ENST00000404914 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.38■□□□□ 0.212e-7■■□□□ 13
ATG4B-205ENST00000404914 RNF8O76064 485 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 HAUS5O94927 633 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 CYP1A1P04798 512 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-205ENST00000404914 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-205ENST00000404914 PEX3P56589 373 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 OCRLQ01968 901 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 PDIA2Q13087 525 aaKnown RBP16.37■□□□□ 0.21
ATG4B-205ENST00000404914 TFDP1Q14186 410 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 MSS51Q4VC12 460 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 LMBRD2Q68DH5 695 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-205ENST00000404914 SCYL3Q8IZE3 742 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 MAIP1Q8WWC4 291 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 GATA6Q92908 595 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 VTI1AQ96AJ9 217 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 ARHGEF4Q9NR80 690 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 LIASO43766 372 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 ZCCHC18P0CG32 403 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 SLC18A1P54219 525 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 SLC34A1Q06495 639 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 THOC5Q13769 683 aaKnown RBP16.37■□□□□ 0.21
ATG4B-205ENST00000404914 WDR72Q3MJ13 1102 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 CEP55Q53EZ4 464 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 KRT39Q6A163 491 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 SHKBP1Q8TBC3 707 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 NT5C1BQ96P26 610 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 TRIM4Q9C037 500 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 TMEM206Q9H813 350 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 SCOCQ9UIL1 159 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 ZNF148Q9UQR1 794 aa16.37■□□□□ 0.21
ATG4B-205ENST00000404914 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.37■□□□□ 0.21
ATG4B-205ENST00000404914 IRF6O14896 467 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 GYG2O15488 501 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 CCDC22O60826 627 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 CETN2P41208 172 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 SPP2Q13103 211 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 RAB20Q9NX57 234 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 LARSQ9P2J5 1176 aaKnown RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 ANKFY1Q9P2R3 1169 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 KAT6AQ92794 2004 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 E5RJQ4 531 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 IPO5O00410 1097 aaKnown RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 ATF7P17544 494 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 SERPINB4P48594 390 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 GPC3P51654 580 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 SV2AQ7L0J3 742 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 C12orf56Q8IXR9 622 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 BBOF1Q8ND07 529 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 ZFAND2BQ8WV99 257 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 OCEL1Q9H607 264 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 MYH9P35579 1960 aaKnown RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 LMNAP02545 664 aaKnown RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 ECE1P42892 770 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 ANKRD22Q5VYY1 191 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 MFSD7Q6UXD7 560 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 MZB1Q8WU39 189 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 FGD4Q96M96 766 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 EPAS1Q99814 870 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 TMEM120AQ9BXJ8 343 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 VCXQ9H320 206 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 KCND2Q9NZV8 630 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 PSMC3IPQ9P2W1 217 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-205ENST00000404914 RABGEF1Q9UJ41 708 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 ZHX2Q9Y6X8 837 aa16.36■□□□□ 0.21
ATG4B-205ENST00000404914 DPEP1P16444 411 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 SOX10P56693 466 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 SLC5A9Q2M3M2 681 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 MDH1BQ5I0G3 518 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 RNASEH2BQ5TBB1 312 aaKnown RBP16.35■□□□□ 0.21
ATG4B-205ENST00000404914 FYB2Q5VWT5 728 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 SPOPLQ6IQ16 392 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 MON1BQ7L1V2 547 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 FBXL13Q8NEE6 735 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms