RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SLC13A1Q9BZW2 595 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 MANSC1Q9H8J5 431 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 HNRNPDLO14979 420 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 ATP5HO75947 161 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 PSMG1O95456 288 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 NFX1Q12986 1120 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 FNBP1LQ5T0N5 605 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 PALM2Q8IXS6 379 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 INPP5DQ92835 1189 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 CCDC124Q96CT7 223 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 AGBL1Q96MI9 1066 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 BTBD10Q9BSF8 475 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 TSSK1BQ9BXA7 367 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 NMUR2Q9GZQ4 415 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 PCMTD2Q9NV79 361 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 ANKFY1Q9P2R3 1169 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 PPARGC1AQ9UBK2 798 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 E5RJQ4 531 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 CCDC22O60826 627 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 AVILO75366 819 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 NT5C2P49902 561 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 GDF10P55107 478 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 GPX6P59796 221 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 BASP1P80723 227 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 DGKZQ13574 1117 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 LAMB3Q13751 1172 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 OR52E8Q6IFG1 317 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 MOXD1Q6UVY6 613 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 IZUMO2Q6UXV1 221 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 RHOT1Q8IXI2 618 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 DCAF4Q8WV16 495 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 TRIM55Q9BYV6 548 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 KCNH7Q9NS40 1196 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 SEL1LQ9UBV2 794 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 PACSIN3Q9UKS6 424 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 PCDHB4Q9Y5E5 795 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 CLRN2A0PK11 232 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 TCP10L2B9ZVM9 353 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 TXNDC9O14530 226 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 IRF6O14896 467 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 EIF2AK2P19525 551 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 CIITAP33076 1130 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 RARRES1P49788 294 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 RPS6KA3P51812 740 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 ALDH18A1P54886 795 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 WNT7BP56706 349 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 CCNG2Q16589 344 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 CCDC62Q6P9F0 684 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 ZCCHC9Q8N567 271 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 RBM17Q96I25 401 aaKnown RBP10.08□□□□□ -0.8
SMC1B-202ENST00000404354 NSL1Q96IY1 281 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 PAFAH2Q99487 392 aa10.08□□□□□ -0.8
SMC1B-202ENST00000404354 F5H423 210 aaPredicted RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CYB561D2O14569 222 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 MAP3K7O43318 606 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 WFS1O76024 890 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 SORBS2O94875 1100 aaKnown RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 TOP3BO95985 862 aaKnown RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CCNG1P51959 295 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 STAT2P52630 851 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 ARL4CP56559 192 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CCDC15Q0P6D6 951 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 SPP2Q13103 211 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 SLC15A2Q16348 729 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CTC1Q2NKJ3 1217 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 WASHC2DQ5SRD0 308 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CYP4A22Q5TCH4 519 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CCDC33Q8N5R6 958 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 FBXO41Q8TF61 875 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 C8orf37Q96NL8 207 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 EPAS1Q99814 870 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 TRIM56Q9BRZ2 755 aaKnown RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 TMEM206Q9H813 350 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 EURLQ9NYK6 297 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 PI4KBQ9UBF8 816 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 FAM198AQ9UFP1 575 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 TELO2Q9Y4R8 837 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 ARHGAP42A6NI28 874 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 FCHO1O14526 889 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 DNALI1O14645 258 aaPredicted RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 LPXNO60711 386 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 PROSCO94903 275 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 PYGBP11216 843 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 ACADSP16219 412 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 GLRA2P23416 452 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 KLRC2P26717 231 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 ROR2Q01974 943 aaKnown RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 SLC34A1Q06495 639 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 KLF1Q13351 362 aaPredicted RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 FAXCQ5TGI0 409 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 DCUN1D2Q6PH85 259 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 ZCCHC23Q6ZST2 131 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 FBXO36Q8NEA4 188 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 RILPQ96NA2 401 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 ACAP3Q96P50 834 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 MCEEQ96PE7 176 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms