RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 KIAA1586Q9HCI6 787 aa14.35□□□□□ -0.11
SDF4-203ENST00000403997 SLC39A2Q9NP94 309 aa14.35□□□□□ -0.11
SDF4-203ENST00000403997 ASAH2Q9NR71 780 aa14.35□□□□□ -0.11
SDF4-203ENST00000403997 HSPBP1Q9NZL4 362 aa14.35□□□□□ -0.11
SDF4-203ENST00000403997 ITGA11Q9UKX5 1188 aa14.35□□□□□ -0.11
SDF4-203ENST00000403997 R3HCC1Q9Y3T6 440 aaKnown RBP14.35□□□□□ -0.11
SDF4-203ENST00000403997 A0A1B0GVL5 298 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 CLIC2O15247 247 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
SDF4-203ENST00000403997 SOAT2O75908 522 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 MICAL2O94851 1124 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 GJA1P17302 382 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 AOC1P19801 751 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 RBP5P82980 135 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 EHHADHQ08426 723 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 BFSP1Q12934 665 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 SURF1Q15526 300 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 MGAT5BQ3V5L5 792 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 LMBRD2Q68DH5 695 aaPredicted RBP14.34□□□□□ -0.11
SDF4-203ENST00000403997 TANGO2Q6ICL3 276 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 POTEHQ6S545 545 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 TTC9BQ8N6N2 239 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 LEMD2Q8NC56 503 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 ANKRD36BP1Q96IX9 119 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 RTP3Q9BQQ7 232 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 MTMR12Q9C0I1 747 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 IRF2BPLQ9H1B7 796 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 TBC1D17Q9HA65 648 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 ARHGEF3Q9NR81 526 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 AGPAT3Q9NRZ7 376 aa14.34□□□□□ -0.11
SDF4-203ENST00000403997 H0Y858 1186 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 NRG2O14511 850 aaPredicted RBP14.33□□□□□ -0.12
SDF4-203ENST00000403997 TGFB1I1O43294 461 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
SDF4-203ENST00000403997 HUS1O60921 280 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 ECI2O75521 394 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 TNNC2P02585 160 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 PFKFB1P16118 471 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 TUFMP49411 452 aaKnown RBP14.33□□□□□ -0.12
SDF4-203ENST00000403997 CYP2J2P51589 502 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 EPHA5P54756 1037 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 SNRPFP62306 86 aaKnown RBP14.33□□□□□ -0.12
SDF4-203ENST00000403997 SMARCB1Q12824 385 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 DUOXA2Q1HG44 320 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 FAM78AQ5JUQ0 283 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 HS2ST1Q7LGA3 356 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 DNAJB7Q7Z6W7 309 aaPredicted RBP14.33□□□□□ -0.12
SDF4-203ENST00000403997 LRRTM3Q86VH5 581 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 DCP1BQ8IZD4 617 aaKnown RBP14.33□□□□□ -0.12
SDF4-203ENST00000403997 PDCL2Q8N4E4 241 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 OR5B17Q8NGF7 314 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 FAM200AQ8TCP9 573 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 PAGE5Q96GU1 130 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 SEPT5Q99719 369 aaPredicted RBP14.33□□□□□ -0.12
SDF4-203ENST00000403997 PLA2G2FQ9BZM2 168 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 DNAJC25Q9H1X3 360 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 ZFP14Q9HCL3 533 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 INTS13Q9NVM9 706 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 USP25Q9UHP3 1055 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 ASB3Q9Y575 518 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 ATP6V1DQ9Y5K8 247 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 UBE4BO95155 1302 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 KMT2EQ8IZD2 1858 aa14.33□□□□□ -0.12
SDF4-203ENST00000403997 MOSPD3O75425 235 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 TSPY1Q01534 308 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 PFKPQ01813 784 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 SNW1Q13573 536 aaKnown RBP14.32□□□□□ -0.12
SDF4-203ENST00000403997 TEAD2Q15562 447 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 KNOP1Q1ED39 458 aaKnown RBP14.32□□□□□ -0.12
SDF4-203ENST00000403997 SLC44A4Q53GD3 710 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 CXorf38Q8TB03 319 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 SHKBP1Q8TBC3 707 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 ATOH1Q92858 354 aaPredicted RBP14.32□□□□□ -0.12
SDF4-203ENST00000403997 ELSPBP1Q96BH3 223 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 SHDQ96IW2 340 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 ZSWIM3Q96MP5 696 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 FNBP1Q96RU3 617 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 SLITRK6Q9H5Y7 841 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 EXOC1Q9NV70 894 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 ABI2Q9NYB9 513 aaPredicted RBP14.32□□□□□ -0.12
SDF4-203ENST00000403997 SIX4Q9UIU6 781 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 L1RE1Q9UN81 338 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 SNX9Q9Y5X1 595 aa14.32□□□□□ -0.12
SDF4-203ENST00000403997 A0A1W2PRU2 124 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 KLRC4O43908 158 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 DLATP10515 647 aaKnown RBP14.31□□□□□ -0.12
SDF4-203ENST00000403997 TNNI1P19237 187 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 SYKP43405 635 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 MYO1EQ12965 1108 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 VEPH1Q14D04 833 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 TAF12Q16514 161 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 SNRNP35Q16560 246 aaKnown RBP14.31□□□□□ -0.12
SDF4-203ENST00000403997 KMT5BQ4FZB7 885 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 PHLDB3Q6NSJ2 640 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 ITIH5Q86UX2 942 aa14.31□□□□□ -0.12
SDF4-203ENST00000403997 TMC8Q8IU68 726 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms