RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 DDX27Q96GQ7 796 aaKnown RBP13.03□□□□□ -0.32
CLIP4-203ENST00000401617 ZIC5Q96T25 663 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 EIF2AQ9BY44 585 aaKnown RBP13.03□□□□□ -0.32
CLIP4-203ENST00000401617 ELOVL4Q9GZR5 314 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 LCMT1Q9UIC8 334 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 C17orf102A2RUQ5 167 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 FAM187AA6NFU0 413 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 TTI1O43156 1089 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 MED7O43513 233 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 PHF2O75151 1096 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 CYBAP13498 195 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 GSCP56915 257 aaPredicted RBP13.02□□□□□ -0.33
CLIP4-203ENST00000401617 GJA9P57773 515 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 LACTBP83111 547 aaPredicted RBP13.02□□□□□ -0.33
CLIP4-203ENST00000401617 ZNF200P98182 395 aaPredicted RBP13.02□□□□□ -0.33
CLIP4-203ENST00000401617 DHX34Q14147 1143 aaKnown RBP13.02□□□□□ -0.33
CLIP4-203ENST00000401617 DENND1BQ6P3S1 775 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 TTC39CQ8N584 583 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.33
CLIP4-203ENST00000401617 TMEM40Q8WWA1 233 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 ZMAT2Q96NC0 199 aaKnown RBP13.02□□□□□ -0.33
CLIP4-203ENST00000401617 TWNKQ96RR1 684 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
CLIP4-203ENST00000401617 CXCL16Q9H2A7 254 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 PLEKHA4Q9H4M7 779 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 MED4Q9NPJ6 270 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 SNTG2Q9NY99 539 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 PCYOX1Q9UHG3 505 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 CASP8AP2Q9UKL3 1982 aa13.02□□□□□ -0.33
CLIP4-203ENST00000401617 AGPSO00116 658 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 PSTPIP1O43586 416 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 FAM153BP0C7A2 387 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 GNAT1P11488 350 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 CHRNA3P32297 505 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 PTGIRP43119 386 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 CRYBB1P53674 252 aaPredicted RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 PTPN11Q06124 597 aaPredicted RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 FAM153CQ494X1 144 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 XKR4Q5GH76 650 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 IFT81Q8WYA0 676 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 TMEM176AQ96HP8 235 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 PLVAPQ9BX97 442 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 CNTN3Q9P232 1028 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 IP6K2Q9UHH9 426 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 FAM153AQ9UHL3 310 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 GINS2Q9Y248 185 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 CEP83Q9Y592 693 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 TCRBV7S2A1N4TA0A589 114 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 SYF2O95926 243 aaKnown RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 DRG2P55039 364 aaKnown RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 TAP1Q03518 808 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 DUPD1Q68J44 220 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 ADAT2Q7Z6V5 191 aaKnown RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 TSEN2Q8NCE0 465 aaKnown RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 C3orf20Q8ND61 904 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.01□□□□□ -0.33
CLIP4-203ENST00000401617 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 CYTH4Q9UIA0 394 aa13.01□□□□□ -0.33
CLIP4-203ENST00000401617 MYADML2A6NDP7 307 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 RARAP10276 462 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 VDRP11473 427 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 FCGRTP55899 365 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 TAS2R40P59535 323 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 RPL7AP62424 266 aaKnown RBP13□□□□□ -0.33
CLIP4-203ENST00000401617 FAM193AP78312 1265 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 ZNF252P-AS1Q0IIN9 211 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 CNGA2Q16280 664 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 PTPN20Q4JDL3 420 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 UBXN11Q5T124 520 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 ALS2CLQ60I27 953 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 ERICH1Q86X53 443 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 NIPA2Q8N8Q9 360 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 FAM71BQ8TC56 605 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 FAM114A2Q9NRY5 505 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 KIAA1257Q9ULG3 409 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13□□□□□ -0.33
CLIP4-203ENST00000401617 GJB6O95452 261 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 CD19P15391 556 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 HSPA9P38646 679 aaKnown RBP13□□□□□ -0.33
CLIP4-203ENST00000401617 PSMC4P43686 418 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 YARSP54577 528 aaKnown RBP13□□□□□ -0.33
CLIP4-203ENST00000401617 DR1Q01658 176 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 TTC27Q6P3X3 843 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 RHOT1Q8IXI2 618 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 IQCKQ8N0W5 287 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 LRRC52Q8N7C0 313 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 TRIB2Q92519 343 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 RUNDC3BQ96NL0 473 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 ERP44Q9BS26 406 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 MTG1Q9BT17 334 aaPredicted RBP13□□□□□ -0.33
CLIP4-203ENST00000401617 RAB17Q9H0T7 212 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 NXF3Q9H4D5 531 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms